RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DCDP81605 110 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 MYL5Q02045 173 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 Q6AWC8 147 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 IZUMO2Q6UXV1 221 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 C3orf56Q8N813 242 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 OR8D4Q8NGM9 314 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 DIRC1Q969H9 104 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC00526Q96FQ7 95 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 PKMYT1Q99640 499 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 PLA2G12AQ9BZM1 189 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 BANF2Q9H503 90 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF586Q9NXT0 402 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 DNAJC15Q9Y5T4 150 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC00312Q9Y6C7 94 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 CHCHD2Q9Y6H1 151 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 ZSWIM8A7E2V4 1837 aa2.09□□□□□ -2.08
SMCHD1-213ENST00000609587 MYH6P13533 1939 aa2.09□□□□□ -2.08
SMCHD1-213ENST00000609587 MYH9P35579 1960 aaKnown RBP2.09□□□□□ -2.08
SMCHD1-213ENST00000609587 CITO14578 2027 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 FANCAO15360 1455 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 COL1A1P02452 1464 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 MED1Q15648 1581 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 IGLV3-9A0A075B6K5 115 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 PNMA8CA0A1B0GUJ8 204 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 LOC107986453A0A1B0GWG9 222 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 UQCRQO14949 82 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 SNAPC5O75971 98 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 CD2P06729 351 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 SPINK8P0C7L1 97 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 IGLC1P0CG04 106 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 CCL3P10147 92 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 CRYGAP11844 174 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 FABP2P12104 132 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 NPPCP23582 126 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 ARPP19P56211 112 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 TSPEAR-AS2P59090 65 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 TAS2R45P59539 299 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 YPEL3P61236 119 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 FOXF1Q12946 379 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 KLRD1Q13241 179 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 DEFB134Q4QY38 66 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 MRPL51Q4U2R6 128 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 PATE2Q6UY27 113 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 SPATA12Q7Z6I5 190 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 TEX29Q8N6K0 151 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 PACRGLQ8N7B6 248 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 DAND5Q8N907 189 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 OR10P1Q8NGE3 313 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 CIB3Q96Q77 187 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 RIMBP3CA6NJZ7 1639 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 RIMBP3BA6NNM3 1639 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 RIMBP3Q9UFD9 1639 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 SCAPERQ9BY12 1400 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 SEC16AO15027 2179 aa2.08□□□□□ -2.08
SMCHD1-213ENST00000609587 ECM29Q5VYK3 1845 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 POLA1P09884 1462 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 CFTRP13569 1480 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 TRBV20-1A0A075B6N2 111 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 IGHV3-21A0A0B4J1V1 117 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 NDUFB3O43676 98 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 KLF7O75840 302 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 PYYP10082 97 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 CCL4P13236 92 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 HRES1P13985 223 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 SRP14P37108 136 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 HIST1H4AP62805 103 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 CLLU1Q5K131 121 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 C6orf52Q5T4I8 152 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 ZNF660Q6AZW8 331 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 C7orf65Q6ZTY9 151 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 WFDC11Q8NEX6 87 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 OTOSQ8NHW6 89 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 C2orf15Q8WU43 125 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 AGPAT4-IT1Q9H0P7 198 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 SLC35B3Q9H1N7 401 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 PRO1933Q9H354 126 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 XAGE1AQ9HD64 81 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 COMMD3Q9UBI1 195 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 LSM2Q9Y333 95 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 R4GN34 69 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 SPHKAPQ2M3C7 1700 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 N4BP2Q86UW6 1770 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 POLEQ07864 2286 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 MAGI2Q86UL8 1455 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 ABCC3O15438 1527 aa2.07□□□□□ -2.08
SMCHD1-213ENST00000609587 ADAMTS12P58397 1594 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 SHANK1Q9Y566 2161 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 ARHGEF28Q8N1W1 1705 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 OBSL1O75147 1896 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 TCRBV3S1A0A5B6 114 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 TMEM262E9PQX1 116 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 M0R2P5 195 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 LEPROTO15243 131 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
SMCHD1-213ENST00000609587 TRGC1P0CF51 173 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms