RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 OR52N5Q8NH56 324 aa3.79□□□□□ -1.8
HDDC2-208ENST00000609021 DPH3P1Q9H4G8 78 aa3.79□□□□□ -1.8
HDDC2-208ENST00000609021 TAAR2Q9P1P5 351 aa3.79□□□□□ -1.8
HDDC2-208ENST00000609021 SVILO95425 2214 aa3.79□□□□□ -1.8
HDDC2-208ENST00000609021 GFRA3O60609 400 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 NDUFS7O75251 213 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ACYP1P07311 99 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 LGALS3P17931 250 aaKnown RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 NCBP2P52298 156 aaKnown RBP eCLIP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 GFERP55789 205 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 LOXL3P58215 753 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 HBBP68871 147 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 LOXL1Q08397 574 aaPredicted RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ZNF525Q8N782 197 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 DCAF4L2Q8NA75 395 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 PFN4Q8NHR9 129 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ODF3Q96PU9 254 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 RALGAPA1Q6GYQ0 2036 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 K7EM74 188 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 CRYGSP22914 178 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 CFHR1Q03591 330 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 RSPO1Q2MKA7 263 aaPredicted RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 CENPWQ5EE01 88 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 CNRIP1Q96F85 164 aaPredicted RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 IGHV3OR15-7A0A075B7D8 119 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 PAX4O43316 350 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 RNASE2P10153 161 aaKnown RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 CXCL5P42830 114 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 APOC4P55056 127 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 RBM3P98179 157 aaKnown RBP3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ZNF542PQ5EBM4 170 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 C2orf82Q6UX34 121 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ADAMTSL4Q6UY14 1074 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 ZFP2Q6ZN57 461 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 C11orf45Q8TAV5 145 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 TMEM158Q8WZ71 300 aa3.78□□□□□ -1.8
HDDC2-208ENST00000609021 LINC01553A4QN01 128 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 C17orf51A8MQB3 221 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 CLDN14O95500 239 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LTAP01374 205 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 PSMB8P28062 276 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LOXP28300 417 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 DAD1P61803 113 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 FOXF2Q12947 444 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 OR5AS1Q8N127 324 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 CALYQ9NYX4 217 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 CFAP54Q96N23 3096 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 C15orf62A8K5M9 175 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 M0R1B8 84 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LGALS9O00182 355 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 PEX7O00628 323 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LCE2BO14633 110 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 SPINT3P49223 89 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF137PP52743 207 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF138P52744 262 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 TMEM170BQ5T4T1 132 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 IFI27L1Q96BM0 104 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 TRGV9Q99603 122 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 FAM60AQ9NP50 221 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF355PQ9NSJ1 428 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 MED13Q9UHV7 2174 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 MDC1Q14676 2089 aaKnown RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 TRBV20OR9-2A0A075B6H5 130 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 IGF1P05019 195 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 HMGN2P05204 90 aaKnown RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 HLA-DMBP28068 263 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 CDAP32320 146 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 SNRPD3P62318 126 aaKnown RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 TWIST1Q15672 202 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 ECSCRQ19T08 205 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-208ENST00000609021 RPRMLQ8N4K4 120 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 FMC1Q96HJ9 113 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 AICDAQ9GZX7 198 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 TAC3Q9UHF0 121 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 MOB4Q9Y3A3 225 aa3.77□□□□□ -1.81
HDDC2-208ENST00000609021 LRP4O75096 1905 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 SMIM27A0A1W2PRY6 76 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 TIMM17BO60830 172 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 DUTP33316 252 aaKnown RBP3.76□□□□□ -1.81
HDDC2-208ENST00000609021 MYCNOSP40205 109 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 ATXN8Q156A1 80 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 NFAM1Q8NET5 270 aaPredicted RBP3.76□□□□□ -1.81
HDDC2-208ENST00000609021 IGF2BP2-AS1Q96M15 143 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 FANCMQ8IYD8 2048 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 TEX49A0A1B0GTD5 131 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 A0A1B0GWA3 101 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 HIGD1CA8MV81 97 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 OXTP01178 125 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 RPS27P42677 84 aaKnown RBP3.76□□□□□ -1.81
HDDC2-208ENST00000609021 EFNA4P52798 201 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 EDDM3BP56851 147 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 SSMEM1Q8WWF3 244 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 PLPPR2Q96GM1 343 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 C11orf68Q9H3H3 251 aaKnown RBP3.76□□□□□ -1.81
HDDC2-208ENST00000609021 DYNLRB1Q9NP97 96 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms