RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 D6R8Y8 96 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 CIARTQ8N365 385 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-217ENST00000608425 NRGNQ92686 78 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 CFAP47Q6ZTR5 3102 aa9.48□□□□□ -0.89
CTCFL-217ENST00000608425 SP1P08047 785 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTCFL-217ENST00000608425 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 ZBTB34Q8NCN2 500 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 RASL10AQ92737 203 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
CTCFL-217ENST00000608425 DUTP33316 252 aaKnown RBP9.47□□□□□ -0.89
CTCFL-217ENST00000608425 MPV17P39210 176 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 ADIPOQQ15848 244 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
CTCFL-217ENST00000608425 PTPRBP23467 1997 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 C19orf71A6NCJ1 209 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 SNCGO76070 127 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 PLGLB1Q02325 96 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 SRYQ05066 204 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 C3orf36Q3SXR2 165 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 DLX4Q92988 240 aaPredicted RBP9.46□□□□□ -0.89
CTCFL-217ENST00000608425 MLST8Q9BVC4 326 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 C12orf49Q9H741 205 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 PCNX2A6NKB5 2137 aa9.46□□□□□ -0.89
CTCFL-217ENST00000608425 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
CTCFL-217ENST00000608425 PSPNO60542 156 aa9.46□□□□□ -0.9
CTCFL-217ENST00000608425 FCN3O75636 299 aa9.46□□□□□ -0.9
CTCFL-217ENST00000608425 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.9
CTCFL-217ENST00000608425 DCTN5Q9BTE1 182 aa9.46□□□□□ -0.9
CTCFL-217ENST00000608425 HAX1O00165 279 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 PIP4P1Q86T03 277 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 TUSC5Q8IXB3 177 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 RPEQ96AT9 228 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 FLYWCH2Q96CP2 140 aaKnown RBP9.45□□□□□ -0.9
CTCFL-217ENST00000608425 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
CTCFL-217ENST00000608425 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 A0A096LPE4 126 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 A0A1W2PPZ6 126 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 PGPA6NDG6 321 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 HBDP02042 147 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 PPP1R27Q86WC6 154 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 RAXQ9Y2V3 346 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 COL8A1P27658 744 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
CTCFL-217ENST00000608425 RPL39P5Q59GN2 51 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 VCX2Q9H322 139 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
CTCFL-217ENST00000608425 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 SS18L1O75177 396 aaPredicted RBP9.44□□□□□ -0.9
CTCFL-217ENST00000608425 AMN1Q8IY45 258 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 RBMXL3Q8N7X1 1067 aaKnown RBP9.44□□□□□ -0.9
CTCFL-217ENST00000608425 PKIBQ9C010 78 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 TMEM160Q9NX00 188 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 DNAJC13O75165 2243 aa9.44□□□□□ -0.9
CTCFL-217ENST00000608425 NAV3Q8IVL0 2385 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 THBDP07204 575 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 PRSS1P07477 247 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 TBC1D28Q2M2D7 210 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-217ENST00000608425 SRSF12Q8WXF0 261 aaKnown RBP9.43□□□□□ -0.9
CTCFL-217ENST00000608425 RND1Q92730 232 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 LINC01587Q99440 93 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 RASL11BQ9BPW5 248 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 TMEM213A2RRL7 107 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 HOXA3O43365 443 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-217ENST00000608425 PAX8Q06710 450 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 ZGRF1Q86YA3 2104 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
CTCFL-217ENST00000608425 TCL1BO95988 128 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 IL4P05112 153 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 UBTD1Q9HAC8 227 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-217ENST00000608425 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 ZNF503-AS2A6NEH8 195 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTCFL-217ENST00000608425 UTF1Q5T230 341 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 WDR86Q86TI4 376 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 NPIPB3Q92617 1050 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 FOXC2Q99958 501 aa9.42□□□□□ -0.9
CTCFL-217ENST00000608425 IGKCP01834 107 aa9.41□□□□□ -0.9
CTCFL-217ENST00000608425 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms