RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 IGF1P05019 195 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 HOXA5P20719 270 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 NDPQ00604 133 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 EBI3Q14213 229 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 FAM159AQ6UWV7 190 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TMEM14EPQ6UXP3 125 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 RPP25LQ8N5L8 163 aaKnown RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 ZNF491Q8N8L2 437 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 SELENOKQ9Y6D0 94 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TRGV2A0A075B6R0 118 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 LOC102724200A0A096LPH7 203 aaPredicted RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TRAV25A0A0B4J276 109 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 CHEK1O14757 476 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 SNRPCP09234 159 aaKnown RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 PSG1P11464 419 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 LEPP41159 167 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 ELOBQ15370 118 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 FBLN7Q53RD9 439 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 SYT8Q8NBV8 401 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TRGV9Q99603 122 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 BPTFQ12830 3046 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 PGPA6NDG6 321 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 C5orf52A6NGY3 159 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 ZNF253O75346 499 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 RNASE2P10153 161 aaKnown RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 GCHFRP30047 84 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 PAX9P55771 341 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 FAM162BQ5T6X4 162 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TOMM20LQ6UXN7 152 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 KLK15Q9H2R5 256 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 NRN1Q9NPD7 142 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TMEM14BQ9NUH8 114 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 WDR83OSQ9Y284 106 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 HCFC1P51610 2035 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 WDFY4Q6ZS81 3184 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 SRRM4A7MD48 611 aaKnown RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 UBE2CO00762 179 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 RAB4AP20338 218 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 YPEL3P61236 119 aaPredicted RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TCF23Q7RTU1 214 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 SORL1Q92673 2214 aa4.04□□□□□ -1.76
SCARNA15-201ENST00000607520 TOMM40O96008 361 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 NBEAP1P0C6P0 100 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 PMCHP20382 165 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 AMTP48728 403 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 CAMPP49913 170 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 PKIAP61925 76 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 MRPL54Q6P161 138 aaKnown RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 OR2K2Q8NGT1 345 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 PRR25Q96S07 402 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 IGHV7-4-1A0A0J9YVY3 117 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 CA1P00915 261 aaPredicted RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 CRYBB3P26998 211 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 ATP5G3P48201 142 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 C1orf229Q6ZS94 237 aaPredicted RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 SFRP2Q96HF1 295 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 ATP6V0BQ99437 205 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 PLA2G2EQ9NZK7 142 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 SMPXQ9UHP9 88 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 COL27A1Q8IZC6 1860 aaPredicted RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 CBY3A6NI87 242 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 C15orf62A8K5M9 175 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 IGKV1-39P01597 117 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 IGKV1D-39P04432 117 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 RCHY1Q96PM5 261 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 ASCL2Q99929 193 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 VAMP8Q9BV40 100 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 TMEM242Q9NWH2 141 aa4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 RAI1Q7Z5J4 1906 aaPredicted RBP4.03□□□□□ -1.76
SCARNA15-201ENST00000607520 LY6LH3BQJ8 138 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BKO60814 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 FCN3O75636 299 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 INSP01308 110 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BJP06899 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 CXCL1P09341 107 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 CBLN1P23435 193 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BOP23527 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BBP33778 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BDP58876 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BCP62807 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 PAX2Q02962 417 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST2H2BEQ16778 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 OXLD1Q5BKU9 147 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 GPHB5Q86YW7 130 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 LYPD6BQ8NI32 183 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BHQ93079 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 AP1S3Q96PC3 154 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BNQ99877 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 HIST1H2BMQ99879 126 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 GSN-AS1Q9NRJ2 163 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 TRBV24-1A0A075B6N3 115 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 H3BTX0 84 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 GCSAMLQ5JQS6 135 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 C1orf194Q5T5A4 169 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 PIFOQ8TCI5 191 aa4.02□□□□□ -1.77
SCARNA15-201ENST00000607520 GLMPQ8WWB7 406 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms