RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 K7EIL1 84 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 IGLV3-1P01715 115 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 OR10J4P0C629 311 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 RAB5CP51148 216 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 HACD4Q5VWC8 232 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 SPATA8Q6RVD6 105 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 ARPINQ7Z6K5 226 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 TEN1Q86WV5 123 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 PSMF1Q92530 271 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 HYLS1Q96M11 299 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 GPX7Q96SL4 187 aaPredicted RBP0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 PRRT1Q99946 306 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 PAIP2Q9BPZ3 127 aaKnown RBP0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 TMEM138Q9NPI0 162 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 SS18L2Q9UHA2 77 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 UHRF1BP1Q6BDS2 1440 aa0.38□□□□□ -2.35
RNU6-88P-201ENST00000606801 ODAMA1E959 279 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 G3V2T6 193 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 ATG12O94817 140 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 PPYP01298 95 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 PRH1P02810 166 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 TRGC2P03986 189 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 TMED2Q15363 201 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 OR52A1Q9UKL2 312 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 TANC2Q9HCD6 1990 aa0.37□□□□□ -2.35
RNU6-88P-201ENST00000606801 NINQ8N4C6 2090 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 NUP210Q8TEM1 1887 aaPredicted RBP0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 TRAV27A0A087WT01 109 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 C9orf170A2RU37 121 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 JMJD7-PLA2G4BH0Y9G9 81 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 NDUFC2O95298 119 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 TMBIM6P55061 237 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 ARF6P62330 175 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 MRPS25P82663 173 aaKnown RBP0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 MSMO1Q15800 293 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 OR4K15Q8NH41 348 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 OR2J1Q9GZK6 312 aa0.36□□□□□ -2.35
RNU6-88P-201ENST00000606801 C5orf67F2Z3F1 127 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 H7C1C5 153 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 ATP5HO75947 161 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 LCN6P62502 163 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 KLRD1Q13241 179 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 EIF3IQ13347 325 aaKnown RBP0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 CEP19Q96LK0 163 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 GINS3Q9BRX5 216 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 WFDC10AQ9H1F0 79 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 SH3BGRL3Q9H299 93 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 CACYBPQ9HB71 228 aaKnown RBP0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 BCL9O00512 1426 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 CAMSAP2Q08AD1 1489 aa0.35□□□□□ -2.35
RNU6-88P-201ENST00000606801 hDV103S1A0JD37 113 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 MFSD11O43934 449 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 PIAS1O75925 651 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 CSN2P05814 226 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 CD14P08571 375 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 PHBP35232 272 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 MRPS15P82914 257 aaKnown RBP0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 SNCBQ16143 134 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 ZNF714Q96N38 554 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 LYRM2Q9NU23 88 aaPredicted RBP0.34□□□□□ -2.36
RNU6-88P-201ENST00000606801 EIF3AQ14152 1382 aaKnown RBP0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 ANK1P16157 1881 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 RIIAD1A6NNX1 92 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 AIPO00170 330 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 RER1O15258 196 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 IDO1P14902 403 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 FOXA3P55318 350 aaPredicted RBP0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 OR10AC1Q8NH08 325 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 OR10AG1Q8NH19 301 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 ZNF431Q8TF32 576 aaPredicted RBP0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 SMR3AQ99954 134 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 RNF11Q9Y3C5 154 aa0.33□□□□□ -2.36
RNU6-88P-201ENST00000606801 KIAA1549LQ6ZVL6 1849 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 TNCP24821 2201 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 OGNP20774 298 aaKnown RBP0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 CIRBPQ14011 172 aaKnown RBP0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 SCGB2B2Q4G0G5 96 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 AKR1C8PQ5T2L2 129 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 LRRC18Q8N456 261 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 SSR3Q9UNL2 185 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 CTTNBP2Q8WZ74 1663 aa0.32□□□□□ -2.36
RNU6-88P-201ENST00000606801 TRAV23DV6A0A075B6W5 121 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 TRAV5A0A0B4J249 113 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 HIST1H2BKO60814 126 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 IFNA1P01562 189 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 IFNA14P01570 189 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 HIST1H2BJP06899 126 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 GNG3P63215 75 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 SPATA45Q537H7 98 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 SPINK9Q5DT21 86 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 C1orf140Q5VVS0 124 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 LYG2Q86SG7 212 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 SMIM20Q8N5G0 67 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 CARD19Q96LW7 228 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 LIMD2Q9BT23 127 aa0.31□□□□□ -2.36
RNU6-88P-201ENST00000606801 USP54Q70EL1 1684 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms