RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 H3BQ15 152 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 ZNF253O75346 499 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 HIST1H1EP10412 219 aaKnown RBP10.23□□□□□ -0.77
RNF40-212ENST00000602784 TAS2R45P59539 299 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 FOXI2Q6ZQN5 318 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 TRPT1Q86TN4 253 aaKnown RBP10.23□□□□□ -0.77
RNF40-212ENST00000602784 STHQ8IWL8 128 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 LRRC20Q8TCA0 184 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 SAT2Q96F10 170 aaPredicted RBP10.23□□□□□ -0.77
RNF40-212ENST00000602784 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
RNF40-212ENST00000602784 ZNF331Q9NQX6 463 aaPredicted RBP10.23□□□□□ -0.77
RNF40-212ENST00000602784 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 KNCNA6PVL3 124 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 HLA-DRB4P13762 266 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
RNF40-212ENST00000602784 PDE6HQ13956 83 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 ACTL10Q5JWF8 245 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 Q6ZWC4 215 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 OR10G4Q8NGN3 311 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 OR10G9Q8NGN4 311 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 OR10G7Q8NGN6 311 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 HYLS1Q96M11 299 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 SPATA25Q9BR10 227 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 SAV1Q9H4B6 383 aaPredicted RBP10.22□□□□□ -0.77
RNF40-212ENST00000602784 HLA-DRB4X5D2U9 266 aa10.22□□□□□ -0.77
RNF40-212ENST00000602784 TRBV19A0A075B6N1 114 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 KANTRA0A1W2PQU2 76 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 H3BMM0 161 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 BCL2L11O43521 198 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 RAB2AP61019 212 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 PSG3Q16557 428 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 KHDC3LQ587J8 217 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
RNF40-212ENST00000602784 TMUB2Q71RG4 321 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
RNF40-212ENST00000602784 PAXXQ9BUH6 204 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 OR51M1Q9H341 326 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
RNF40-212ENST00000602784 A0A0J9YX75 114 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 A0A1W2PPV4 95 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 NBEAP1P0C6P0 100 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 PYYP10082 97 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 SPP1P10451 314 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 EIF5AP63241 154 aaKnown RBP10.2□□□□□ -0.78
RNF40-212ENST00000602784 TMEM41BQ5BJD5 291 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 EBLN2Q6P2I7 272 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 RNF141Q8WVD5 230 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 FXYD5Q96DB9 178 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
RNF40-212ENST00000602784 AGRNO00468 2067 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 SLC17A3O00476 420 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 OR7C2O60412 319 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 SNRPCP09234 159 aaKnown RBP10.19□□□□□ -0.78
RNF40-212ENST00000602784 NUTF2P61970 127 aaKnown RBP10.19□□□□□ -0.78
RNF40-212ENST00000602784 PSG9Q00887 426 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 LGALSLQ3ZCW2 172 aaPredicted RBP10.19□□□□□ -0.78
RNF40-212ENST00000602784 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 ZNF503Q96F45 646 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 U3KQK5 164 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 DNAH9Q9NYC9 4486 aa10.19□□□□□ -0.78
RNF40-212ENST00000602784 A8MTW9 85 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 H3BTX0 84 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 PFDN1O60925 122 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 DUSP14O95147 198 aaKnown RBP10.18□□□□□ -0.78
RNF40-212ENST00000602784 NDUFB4O95168 129 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 CDC34P49427 236 aaPredicted RBP10.18□□□□□ -0.78
RNF40-212ENST00000602784 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 FAM122CQ6P4D5 195 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 ZNF738Q8NE65 137 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
RNF40-212ENST00000602784 ZNF471Q9BX82 626 aaPredicted RBP10.18□□□□□ -0.78
RNF40-212ENST00000602784 ACTR3CQ9C0K3 210 aaPredicted RBP10.18□□□□□ -0.78
RNF40-212ENST00000602784 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
RNF40-212ENST00000602784 F6UB75 175 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
RNF40-212ENST00000602784 OR10J4P0C629 311 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 SEC11BP0C7V7 166 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 STAG3L2P0CL84 134 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 STAG3L3P0CL85 134 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 DEFB1P60022 68 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 CD300CQ08708 224 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 AKR1C8PQ5T2L2 129 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 LYPD1Q8N2G4 141 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 RAB24Q969Q5 203 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 RPUSD4Q96CM3 377 aaKnown RBP10.17□□□□□ -0.78
RNF40-212ENST00000602784 RNF183Q96D59 192 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms