RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 S100PP25815 95 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-218ENST00000600383 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 SMR3AQ99954 134 aa11.68□□□□□ -0.54
HIF3A-218ENST00000600383 TRAV8-1A0A0A6YYK1 113 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 M0R3E3 92 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
HIF3A-218ENST00000600383 SLC35B1P78383 322 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 TMEM183BQ1AE95 376 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
HIF3A-218ENST00000600383 AAMDCQ9H7C9 122 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 ZNF580Q9UK33 172 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
HIF3A-218ENST00000600383 MTORP42345 2549 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 A0A1W2PPQ1 181 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 PPP1R2P9O14990 202 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 CD99P14209 185 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 S100A12P80511 92 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
HIF3A-218ENST00000600383 PRR27Q6MZM9 219 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 LYPD1Q8N2G4 141 aa11.66□□□□□ -0.54
HIF3A-218ENST00000600383 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
HIF3A-218ENST00000600383 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
HIF3A-218ENST00000600383 NDUFA4O00483 81 aa11.65□□□□□ -0.54
HIF3A-218ENST00000600383 PDE6HQ13956 83 aa11.65□□□□□ -0.54
HIF3A-218ENST00000600383 KLF12Q9Y4X4 402 aa11.65□□□□□ -0.54
HIF3A-218ENST00000600383 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.55
HIF3A-218ENST00000600383 GCGP01275 180 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 PSG9Q00887 426 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 FMC1Q96HJ9 113 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 BIN3Q9NQY0 253 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.55
HIF3A-218ENST00000600383 CUBNO60494 3623 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 PRNTQ86SH4 94 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 GPR82Q96P67 336 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 C12orf57Q99622 126 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 ASCL2Q99929 193 aa11.64□□□□□ -0.55
HIF3A-218ENST00000600383 FOLR2P14207 255 aa11.63□□□□□ -0.55
HIF3A-218ENST00000600383 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
HIF3A-218ENST00000600383 IBA57Q5T440 356 aaKnown RBP11.63□□□□□ -0.55
HIF3A-218ENST00000600383 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
HIF3A-218ENST00000600383 CSN1S1P47710 185 aa11.63□□□□□ -0.55
HIF3A-218ENST00000600383 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
HIF3A-218ENST00000600383 NF1P21359 2839 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 K7EQM0 130 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
HIF3A-218ENST00000600383 AKR1D1P51857 326 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 RAB5BP61020 215 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 TM4SF20Q53R12 229 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 C1orf194Q5T5A4 169 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 ESM1Q9NQ30 184 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-218ENST00000600383 ELANEP08246 267 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 FOXE3Q13461 319 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 U3KQE9 123 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 V9GYV3 84 aa11.62□□□□□ -0.55
HIF3A-218ENST00000600383 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-218ENST00000600383 LTAP01374 205 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 FAM106AQ4KMX7 169 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-218ENST00000600383 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
HIF3A-218ENST00000600383 CA1P00915 261 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-218ENST00000600383 TRGC2P03986 189 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 MEOX2P50222 304 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
HIF3A-218ENST00000600383 FOXL1Q12952 345 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 Q8N2B8 174 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 PSG3Q16557 428 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-218ENST00000600383 NUDT10Q8NFP7 164 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
HIF3A-218ENST00000600383 IGKV3-7A0A075B6H7 116 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-218ENST00000600383 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-218ENST00000600383 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 C16orf54Q6UWD8 224 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 Q6ZSV7 163 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 Q86TA4 180 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms