RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	TMEM147	Q9BVK8	224 aa		10.54	□□□□□ -0.72
IRF3-223	ENST00000599223	XCL2	Q9UBD3	114 aa		10.54	□□□□□ -0.72
IRF3-223	ENST00000599223		H3BMM0	161 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	BUB3	O43684	328 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	SEC11B	P0C7V7	166 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	GDF5OS	Q5U4N7	250 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	HSD17B11	Q8NBQ5	300 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	TMED6	Q8WW62	240 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	NPIPB3	Q92617	1050 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	ACY3	Q96HD9	319 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	GGACT	Q9BVM4	153 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	NRN1	Q9NPD7	142 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	UQCC1	Q9NVA1	299 aa		10.53	□□□□□ -0.72
IRF3-223	ENST00000599223	DEFB131B	A0A096LNP1	70 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	TOMM40	O96008	361 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	RAB5C	P51148	216 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	SIGLEC15	Q6ZMC9	328 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF709	Q8N972	641 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223		Q8WTZ3	238 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	ARV1	Q9H2C2	271 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	PFDN2	Q9UHV9	154 aa		10.52	□□□□□ -0.73
IRF3-223	ENST00000599223	PSG1	P11464	419 aa		10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	HLA-DRB4	P13762	266 aa		10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	OR51G1	Q8NGK1	321 aa		10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	WFDC1	Q9HC57	220 aa		10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	HLA-DRB4	X5D2U9	266 aa		10.51	□□□□□ -0.73
IRF3-223	ENST00000599223	UBE2L5P	A0A1B0GUS4	154 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	SMCO3	A2RU48	225 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	UMAD1	C9J7I0	102 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	C17orf112	F2Z3M2	114 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	RTL8C	O15255	209 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	FXYD7	P58549	80 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	SNRPD3	P62318	126 aa	Known RBP	10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	BLOC1S1	P78537	153 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	DLK1	P80370	383 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	RAB31	Q13636	194 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	OR2G3	Q8NGZ4	309 aa		10.5	□□□□□ -0.73
IRF3-223	ENST00000599223	NACA	E9PAV3	2078 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	IGKV1D-37	A0A075B6S9	117 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	MPDU1	O75352	247 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	IGKV3-20	P01619	116 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF705D	P0CH99	300 aa	Predicted RBP	10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF705B	P0CI00	300 aa	Predicted RBP	10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	RD3L	P0DJH9	198 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	ATP6V0C	P27449	155 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	SULT1A2	P50226	295 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	FAM74A1	Q5RGS3	127 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	AKR1C8P	Q5T2L2	129 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	RNF125	Q96EQ8	232 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	SAT2	Q96F10	170 aa	Predicted RBP	10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	KCNIP2	Q9NS61	270 aa		10.49	□□□□□ -0.73
IRF3-223	ENST00000599223	FNDC10	F2Z333	226 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223		M0R2N4	97 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	SOCS3	O14543	225 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	FGF7	P21781	194 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	CAMLG	P49069	296 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	EMP1	P54849	157 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	ZNF90	Q03938	601 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	ARL16	Q0P5N6	197 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	ETFRF1	Q6IPR1	90 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	LINC00336	Q6ZUF6	198 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	POM121L12	Q8N7R1	296 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	PSMG3	Q9BT73	122 aa	Predicted RBP	10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	PBDC1	Q9BVG4	233 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	C1QTNF4	Q9BXJ3	329 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	WDR61	Q9GZS3	305 aa	Known RBP	10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	SEPSECS	Q9HD40	501 aa	Known RBP	10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	TIMM9	Q9Y5J7	89 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	ABCA13	Q86UQ4	5058 aa		10.48	□□□□□ -0.73
IRF3-223	ENST00000599223	LINC00862	A6NCI5	91 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	PMS2P5	A8MQ11	134 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	TEX46	H3BTG2	121 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	MB	P02144	154 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	NMB	P08949	121 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	RAB2A	P61019	212 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	SERF2	P84101	59 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	AKR1C1	Q04828	323 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	VWC2	Q2TAL6	325 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	DPPA3	Q6W0C5	159 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	SLC35E1	Q96K37	410 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	NDUFAF3	Q9BU61	184 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	NPVF	Q9HCQ7	196 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	MUC4	Q99102	2169 aa		10.47	□□□□□ -0.73
IRF3-223	ENST00000599223	IGHV3OR16-12	A0A075B7B8	117 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223		P0DMU3	169 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	FAM231A	P0DMU4	169 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	FAM231C	P0DMU5	169 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	GPX4	P36969	197 aa	Predicted RBP	10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	NUTF2	P61970	127 aa	Known RBP	10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	NEU1	Q99519	415 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	SLC35B3	Q9H1N7	401 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	SH3BGRL3	Q9H299	93 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	SAV1	Q9H4B6	383 aa	Predicted RBP	10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	PLA2G2E	Q9NZK7	142 aa		10.46	□□□□□ -0.73
IRF3-223	ENST00000599223	HSPG2	P98160	4391 aa		10.46	□□□□□ -0.74

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