RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 UPK3BQ9BT76 320 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 SDF2L1Q9HCN8 221 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 BCL2L10Q9HD36 194 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 TMEM106BQ9NUM4 274 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 MYH4Q9Y623 1939 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 ARID1AO14497 2285 aa3.61□□□□□ -1.83
PAF1-208ENST00000598594 PLEKHH2Q8IVE3 1493 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 TRGV5A0A0B4J1U4 118 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 MUC21A0A0G2JKD1 596 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 SH2D1AO60880 128 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 IGHV1-69P01742 117 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 IGHV1-46P01743 117 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 TPT1P13693 172 aaKnown RBP3.6□□□□□ -1.83
PAF1-208ENST00000598594 ZNF14P17017 642 aaPredicted RBP3.6□□□□□ -1.83
PAF1-208ENST00000598594 FUSP35637 526 aaKnown RBP eCLIP3.6□□□□□ -1.83
PAF1-208ENST00000598594 PCBD1P61457 104 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 SYCNQ0VAF6 134 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 ZNF322Q6U7Q0 402 aaPredicted RBP3.6□□□□□ -1.83
PAF1-208ENST00000598594 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 PSMF1Q92530 271 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 ZNF222Q9UK12 451 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 RPL26L1Q9UNX3 145 aaKnown RBP3.6□□□□□ -1.83
PAF1-208ENST00000598594 LINC00312Q9Y6C7 94 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 RTEL1-TNFRSF6BF6WH68 1400 aa3.6□□□□□ -1.83
PAF1-208ENST00000598594 POLA1P09884 1462 aaPredicted RBP3.6□□□□□ -1.83
PAF1-208ENST00000598594 NUP214P35658 2090 aaPredicted RBP3.59□□□□□ -1.83
PAF1-208ENST00000598594 SUPT6HQ7KZ85 1726 aaKnown RBP3.59□□□□□ -1.83
PAF1-208ENST00000598594 MON2Q7Z3U7 1717 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 LTN1O94822 1766 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 A0A1W2PPR1 153 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 TMEM223A0PJW6 202 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 C19orf71A6NCJ1 209 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 C11orf94C9JXX5 98 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 G3V3Q6 166 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 M0R2P5 195 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 LY6HO94772 140 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 MT-ATP8P03928 68 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 GIG44P09565 113 aaPredicted RBP3.59□□□□□ -1.83
PAF1-208ENST00000598594 NANOS3P60323 173 aaKnown RBP3.59□□□□□ -1.83
PAF1-208ENST00000598594 BLCAPP62952 87 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 DYNLT1P63172 113 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 PEA15Q15121 130 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 IQCJQ1A5X6 159 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 MIC13Q5XKP0 118 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 OR2T2Q6IF00 324 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 Q6ZS92 163 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 FAM216BQ8N7L0 139 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.59□□□□□ -1.83
PAF1-208ENST00000598594 CLDND2Q8NHS1 167 aa3.59□□□□□ -1.83
PAF1-208ENST00000598594 AHDC1Q5TGY3 1603 aaPredicted RBP3.59□□□□□ -1.84
PAF1-208ENST00000598594 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 TRBV24-1A0A075B6N3 115 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 A6NDX4 124 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 CYSRT1A8MQ03 144 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 C17orf51A8MQB3 221 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 H3BMM0 161 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 H3BQ15 152 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 YPEL1O60688 119 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 EDF1O60869 148 aaKnown RBP3.58□□□□□ -1.84
PAF1-208ENST00000598594 NPYP01303 97 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 T-ENOLP0DO92 83 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 SLC25A4P12235 298 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 DCDP81605 110 aaKnown RBP3.58□□□□□ -1.84
PAF1-208ENST00000598594 FOXF1Q12946 379 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 CIRBPQ14011 172 aaKnown RBP3.58□□□□□ -1.84
PAF1-208ENST00000598594 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 KHDC3LQ587J8 217 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 CRIP3Q6Q6R5 217 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 OR5AS1Q8N127 324 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 Q8N2B8 174 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 Q8N9W7 124 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 PFN4Q8NHR9 129 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 RHOXF1Q8NHV9 184 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 UBE2WQ96B02 151 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 ZNRD1Q9P1U0 126 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 SCAPERQ9BY12 1400 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 ADGRL1O94910 1474 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 ERVK-7P63135 1459 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 SCN1AP35498 2009 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 GTF3C1Q12789 2109 aa3.58□□□□□ -1.84
PAF1-208ENST00000598594 MDFIC2A0A1B0GVS7 189 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 FAM24AA6NFZ4 105 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 TCL1BO95988 128 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 FABP4P15090 132 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 NPC2P61916 151 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
PAF1-208ENST00000598594 GAPVD1Q14C86 1478 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 SS18Q15532 418 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 MIAQ16674 131 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 ZNF660Q6AZW8 331 aaPredicted RBP3.57□□□□□ -1.84
PAF1-208ENST00000598594 IGFL3Q6UXB1 125 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 LINC01560Q8TB33 94 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 SMCR5Q8TEV8 140 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 WDR90Q96KV7 1748 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 UACAQ9BZF9 1416 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 PLXNA4Q9HCM2 1894 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 TAS2R4Q9NYW5 299 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 OR5V1Q9UGF6 321 aa3.57□□□□□ -1.84
PAF1-208ENST00000598594 ICOSQ9Y6W8 199 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms