RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 RAB24Q969Q5 203 aa11.53□□□□□ -0.56
FOXA3-202ENST00000594297 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
FOXA3-202ENST00000594297 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
FOXA3-202ENST00000594297 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
FOXA3-202ENST00000594297 SEPSECSQ9HD40 501 aaKnown RBP11.53□□□□□ -0.56
FOXA3-202ENST00000594297 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
FOXA3-202ENST00000594297 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 C2orf70A6NJV1 201 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 BUB3O43684 328 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 OR7C2O60412 319 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 FAM74A1Q5RGS3 127 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 LCN12Q6JVE5 192 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 MIR17HGQ75NE6 70 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
FOXA3-202ENST00000594297 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 FOLR2P14207 255 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
FOXA3-202ENST00000594297 MEOX2P50222 304 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 RPL11P62913 178 aaKnown RBP11.51□□□□□ -0.57
FOXA3-202ENST00000594297 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 IQCF2Q8IXL9 164 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 SCRT1Q9BWW7 348 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 U3KQE9 123 aa11.51□□□□□ -0.57
FOXA3-202ENST00000594297 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 TMEM213A2RRL7 107 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 CHEK1O14757 476 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 PPT1P50897 306 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 PAFAH1B2P68402 229 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 SAMD13Q5VXD3 122 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 PAXXQ9BUH6 204 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 OR51M1Q9H341 326 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
FOXA3-202ENST00000594297 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 STAG3L2P0CL84 134 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 STAG3L3P0CL85 134 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 FHITP49789 147 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 CD81P60033 236 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 GUK1Q16774 197 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 SPATA31B1PQ5VZV4 182 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 LEMD1Q68G75 181 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 RBPMS2Q6ZRY4 209 aaKnown RBP11.49□□□□□ -0.57
FOXA3-202ENST00000594297 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
FOXA3-202ENST00000594297 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 HMGB3O15347 200 aaKnown RBP11.48□□□□□ -0.57
FOXA3-202ENST00000594297 IFNA1P01562 189 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 CSN3P07498 182 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 PSMB3P49720 205 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
FOXA3-202ENST00000594297 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 SLC25A2Q9BXI2 301 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
FOXA3-202ENST00000594297 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
FOXA3-202ENST00000594297 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
FOXA3-202ENST00000594297 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
FOXA3-202ENST00000594297 IFITM2Q01629 132 aa11.47□□□□□ -0.57
FOXA3-202ENST00000594297 TCF24Q7RTU0 167 aa11.47□□□□□ -0.57
FOXA3-202ENST00000594297 DEFB125Q8N687 156 aa11.47□□□□□ -0.57
FOXA3-202ENST00000594297 TRAV25A0A0B4J276 109 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
FOXA3-202ENST00000594297 RGS13O14921 159 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 CD7P09564 240 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 GCHFRP30047 84 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 GLMPQ8WWB7 406 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 HRH4Q9H3N8 390 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 SRD5A3Q9H8P0 318 aa11.46□□□□□ -0.57
FOXA3-202ENST00000594297 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.58
FOXA3-202ENST00000594297 A0A1B0GV50 99 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 CXorf65A6NEN9 183 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 TAGLN2P37802 199 aaKnown RBP11.45□□□□□ -0.58
FOXA3-202ENST00000594297 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
FOXA3-202ENST00000594297 PSG9Q00887 426 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 CLLU1Q5K131 121 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 MORN5Q5VZ52 161 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 RYR1P21817 5038 aa11.45□□□□□ -0.58
FOXA3-202ENST00000594297 A0A087X0K7 114 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 NUPR2A6NF83 97 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 OR10J4P0C629 311 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 PYYP10082 97 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 ID1P41134 155 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 PDE6HQ13956 83 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 DEFB114Q30KQ6 69 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms