RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NRTNQ99748 197 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 SPANXDQ9BXN6 97 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 PLA2G12AQ9BZM1 189 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 AICDAQ9GZX7 198 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 RERGLQ9H628 205 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 RYR2Q92736 4967 aa3.25□□□□□ -1.89
SMAD4-216ENST00000593223 ANK3Q12955 4377 aaKnown RBP3.25□□□□□ -1.89
SMAD4-216ENST00000593223 NUP210Q8TEM1 1887 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 WNK1Q9H4A3 2382 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TRAV19A0A0A6YYK7 116 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PINLYPA6NC86 204 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 IZUMO1RA6ND01 250 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 A8MWP6 167 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 C4orf51C9J302 202 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 H7BYZ3 331 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 J3QQQ9 107 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF861PO60384 105 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TNFSF13O75888 250 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 HLA-DPB1P04440 258 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PAEPP09466 180 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ATP6V0CP27449 155 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 CASP1P29466 404 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 GUCA1AP43080 201 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PDGFRLQ15198 375 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PABPC1L2AQ5JQF8 200 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 COL5A1-AS1Q5SY13 56 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 LDLRAD2Q5SZI1 272 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 NCMAPQ5T1S8 102 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 WDR59Q6PJI9 974 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 WDR86Q86TI4 376 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 LHFPL1Q86WI0 220 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 C1orf174Q8IYL3 243 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 LINC01555Q8NAE3 123 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 OR1J4Q8NGS1 313 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 LMX1AQ8TE12 382 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PP6455Q8WZ26 134 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TMEM158Q8WZ71 300 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 FAM104AQ969W3 186 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TOMM6Q96B49 74 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TEX37Q96LM6 180 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 SPIN2AQ99865 258 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 SPIN2BQ9BPZ2 258 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 TM2D3Q9BRN9 247 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF436Q9C0F3 470 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 WDR61Q9GZS3 305 aaKnown RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 METTL1Q9UBP6 276 aaKnown RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 PCTPQ9UKL6 214 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 COQ4Q9Y3A0 265 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 DIDO1Q9BTC0 2240 aaKnown RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ANK1P16157 1881 aa3.24□□□□□ -1.89
SMAD4-216ENST00000593223 COL27A1Q8IZC6 1860 aaPredicted RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF106Q9H2Y7 1883 aaKnown RBP3.24□□□□□ -1.89
SMAD4-216ENST00000593223 ABCA4P78363 2273 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 IGHV3-74A0A0B4J1X5 117 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 ARRDC5A6NEK1 342 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 DPRXA6NFQ7 191 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 TLCD2A6NGC4 264 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 GGT3PA6NGU5 568 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 TMEM212A6NML5 194 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 GGTLC3B5MD39 225 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 KRBOX1C9JBD0 128 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 UBE2L6O14933 153 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 AKAIN1P0CW23 69 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 HIST1H1DP16402 221 aaKnown RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 RAB5CP51148 216 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 DEFA3P59666 94 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 RHOGP84095 191 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 REG3AQ06141 175 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 ELOCQ15369 112 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 MSMO1Q15800 293 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 RSPO1Q2MKA7 263 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 DEFB109BQ30KR1 87 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 Q5XG85 94 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 EBLN2Q6P2I7 272 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 GLIPR1L1Q6UWM5 242 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 UNQ9165/PRO28630Q6UXU0 137 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 TIFABQ6ZNK6 161 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF767PQ75MW2 155 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 C4orf33Q8N1A6 199 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 C9orf62Q8N4C0 152 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF555Q8NEP9 628 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 OR51A4Q8NGJ6 313 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 ZNF721Q8TF20 911 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 BORCS8Q96FH0 119 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 CARD19Q96LW7 228 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 GPX7Q96SL4 187 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 TIMM17AQ99595 171 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 CXCL16Q9H2A7 254 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 C11orf68Q9H3H3 251 aaKnown RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 PLEKHF2Q9H8W4 249 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 BOKQ9UMX3 212 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 SOX21Q9Y651 276 aaPredicted RBP3.23□□□□□ -1.89
SMAD4-216ENST00000593223 V9GYS6 101 aa3.23□□□□□ -1.89
SMAD4-216ENST00000593223 TRBV20OR9-2A0A075B6H5 130 aa3.22□□□□□ -1.89
SMAD4-216ENST00000593223 A0A1B0GW54 56 aa3.22□□□□□ -1.89
SMAD4-216ENST00000593223 TMEM72A0PK05 275 aa3.22□□□□□ -1.89
SMAD4-216ENST00000593223 LINC00862A6NCI5 91 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms