RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	KIR3DS1	Q14943	382 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	LINC00299	Q6ZSB3	139 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	ACOT7L	Q6ZUV0	252 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	LINC00612	Q8N6U2	182 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	LRTM2	Q8N967	370 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	SHANK2-AS3	Q9BTD1	123 aa		12.65	□□□□□ -0.38
CIRBP-238	ENST00000592412	TRAV26-1	A0A087WT03	109 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	CENPX	A8MT69	81 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	WRB	O00258	174 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	SYNGR2	O43760	224 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	SLC25A6	P12236	298 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	HOXA5	P20719	270 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	UPK3B	Q9BT76	320 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412	PTTG2	Q9NZH5	202 aa		12.64	□□□□□ -0.39
CIRBP-238	ENST00000592412		A0A087X0K7	114 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412		H3BP45	60 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	RHOB	P62745	196 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	AKR1C1	Q04828	323 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	PSG3	Q16557	428 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	ESRG	Q1W209	222 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	TMEM144	Q7Z5S9	345 aa		12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412	TMEM263	Q8WUH6	116 aa	Known RBP	12.63	□□□□□ -0.39
CIRBP-238	ENST00000592412		A0A0J9YY99	117 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	MRPS12	O15235	138 aa	Known RBP	12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	RPL7	P18124	248 aa	Known RBP	12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	OR5I1	Q13606	314 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	TMEM128	Q5BJH2	165 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	TTC32	Q5I0X7	151 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	SPANXN5	Q5MJ07	72 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	ZNF493	Q6ZR52	646 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	CYP2G1P	Q6ZSU1	146 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	RXFP4	Q8TDU9	374 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	S100Z	Q8WXG8	99 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	ZNF503	Q96F45	646 aa		12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	CIB3	Q96Q77	187 aa	Predicted RBP	12.62	□□□□□ -0.39
CIRBP-238	ENST00000592412	SRRM2	Q9UQ35	2752 aa	Known RBP	12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	MED6	O75586	246 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	M6PR	P20645	277 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	CDKN1B	P46527	198 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	PLP1	P60201	277 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	DLK1	P80370	383 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412	HIGD1A	Q9Y241	93 aa		12.61	□□□□□ -0.39
CIRBP-238	ENST00000592412		A0A1W2PPQ1	181 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	PMS2P5	A8MQ11	134 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	NDUFB6	O95139	128 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	VAMP1	P23763	118 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	RPP30	P78346	268 aa	Known RBP	12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	PATE2	Q6UY27	113 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412		Q6ZRN7	208 aa	Predicted RBP	12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	RPUSD4	Q96CM3	377 aa	Known RBP	12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	CCDC32	Q9BV29	185 aa		12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412	MRPS16	Q9Y3D3	137 aa	Known RBP	12.6	□□□□□ -0.39
CIRBP-238	ENST00000592412		H7BYZ3	331 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	HYPM	O75409	117 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	IL5	P05113	134 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	LINC00869	P0C866	280 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	S100A7	P31151	101 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	RAP2B	P61225	183 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	OR10J6P	Q8NGY7	276 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	PPP1R14D	Q9NXH3	145 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	ZNF586	Q9NXT0	402 aa		12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	STRAP	Q9Y3F4	350 aa	Known RBP	12.59	□□□□□ -0.39
CIRBP-238	ENST00000592412	PIGBOS1	A0A0B4J2F0	54 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	PLA2G10	O15496	165 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	CCNK	O75909	580 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	HOXB5	P09067	269 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	BTC	P35070	178 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	PPP1R1A	Q13522	171 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	GFI1B	Q5VTD9	330 aa		12.58	□□□□□ -0.4
CIRBP-238	ENST00000592412	GAGE12B	A1L429	117 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	SMCO3	A2RU48	225 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	EPM2A	B3EWF7	344 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	PRAC2	D3DTV9	90 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	LYRM1	O43325	122 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	GAGE7	O76087	117 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	SFT2D2	O95562	160 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	SNRPC	P09234	159 aa	Known RBP	12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	OR5G3	P0C626	314 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	GAGE12F	P0CL80	117 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	GAGE12G	P0CL81	117 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	GAGE12I	P0CL82	117 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	FUS	P35637	526 aa	Known RBP eCLIP	12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	LINC00315	P59091	139 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412	FLVCR2	Q9UPI3	526 aa		12.57	□□□□□ -0.4
CIRBP-238	ENST00000592412		H3BNG1	76 aa		12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	UBE2M	P61081	183 aa	Known RBP	12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	POLR2G	P62487	172 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	ID3	Q02535	119 aa		12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	ZNF846	Q147U1	533 aa		12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	C20orf144	Q9BQM9	153 aa		12.56	□□□□□ -0.4
CIRBP-238	ENST00000592412	SLC17A3	O00476	420 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412	XG	P55808	180 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412	LRRC20	Q8TCA0	184 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412	VSIG2	Q96IQ7	327 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412	ARL6	Q9H0F7	186 aa		12.55	□□□□□ -0.4

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