RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 MRPL54Q6P161 138 aaKnown RBP8.36□□□□□ -1.07
ZNF540-208ENST00000589857 Q86TA4 180 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-208ENST00000589857 KCNS1Q96KK3 526 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 KLK9Q9UKQ9 250 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 RPH3ALQ9UNE2 315 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 TET2Q6N021 2002 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-208ENST00000589857 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 BMPR1BO00238 502 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 ZNF253O75346 499 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 OR2J3O76001 311 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 NDUFB8O95169 186 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 DDTP30046 118 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 HBBP68871 147 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 PRB3Q04118 309 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-208ENST00000589857 LDLRAD2Q5SZI1 272 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
ZNF540-208ENST00000589857 ZNF491Q8N8L2 437 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 NHLRC2Q8NBF2 726 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 PIMREGQ9BSJ6 248 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 C7orf69Q9H7B7 122 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 RABAC1Q9UI14 185 aa8.35□□□□□ -1.07
ZNF540-208ENST00000589857 TRAV20A0A0B4J274 112 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 A0A1W2PPR1 153 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 SERF1AO75920 110 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 CT45A10P0DMU9 189 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 IGLC2P0DOY2 106 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 ZFP36P26651 326 aaKnown RBP8.34□□□□□ -1.07
ZNF540-208ENST00000589857 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 REC114Q7Z4M0 266 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 LINC00479Q96M42 142 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 NEU1Q99519 415 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 PRSS22Q9GZN4 317 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
ZNF540-208ENST00000589857 STAB1Q9NY15 2570 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1W2PRD5 423 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1W2PRF3 423 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1W2PRM7 423 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 GRIFINA4D1Z8 144 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 NPIPB6E9PJ23 425 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 OVOL3O00110 214 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 NPFFO15130 113 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 CD5LO43866 347 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 SRIP30626 198 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 LMO4P61968 165 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 ATRQ13535 2644 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 KLF5Q13887 457 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 LEMD1Q68G75 181 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 GOLT1AQ6ZVE7 132 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 MRPL52Q86TS9 123 aaKnown RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 FAM103A1Q9BTL3 118 aaKnown RBP8.33□□□□□ -1.08
ZNF540-208ENST00000589857 GNB4Q9HAV0 340 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 DOCK11Q5JSL3 2073 aa8.33□□□□□ -1.08
ZNF540-208ENST00000589857 IGHV7-81A0A0B4J1V7 117 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 SPINK4O60575 86 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
ZNF540-208ENST00000589857 RIGQ13278 110 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 PSG3Q16557 428 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 C9orf152Q5JTZ5 239 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 ASPHD1Q5U4P2 390 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 RUSC1-AS1Q66K80 236 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 UNQ5815/PRO19632Q6UWF5 114 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 TOMM20LQ6UXN7 152 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 SIGLEC15Q6ZMC9 328 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 Q8N9W7 124 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF414Q96IQ9 312 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 TBX15Q96SF7 602 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 HSPB9Q9BQS6 159 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 BPESC1Q9GZL8 116 aa8.32□□□□□ -1.08
ZNF540-208ENST00000589857 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 CHEK1O14757 476 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF324O75467 553 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-208ENST00000589857 GPX1P07203 203 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 PMCHP20382 165 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 SAA4P35542 130 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 AMTP48728 403 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 DSCR9P59020 149 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-208ENST00000589857 FAM209BQ5JX69 171 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 CLEC2AQ6UVW9 174 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms