RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 PTTG2Q9NZH5 202 aa12.26□□□□□ -0.45
CXXC1-211ENST00000589548 SMR3BP02814 79 aaPredicted RBP12.25□□□□□ -0.45
CXXC1-211ENST00000589548 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
CXXC1-211ENST00000589548 MRPS10P82664 201 aaKnown RBP12.25□□□□□ -0.45
CXXC1-211ENST00000589548 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
CXXC1-211ENST00000589548 ADAP1O75689 374 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 RLN2P04090 185 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 UBR4Q5T4S7 5183 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 GFI1BQ5VTD9 330 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 ACOT7LQ6ZUV0 252 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 C20orf144Q9BQM9 153 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
CXXC1-211ENST00000589548 ANKRD20A5PA0PJZ0 165 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 CTDSP2O14595 271 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
CXXC1-211ENST00000589548 SIVA1O15304 175 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 SRPXP78539 464 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 CYP2G1PQ6ZSU1 146 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 Q6ZTI0 123 aa12.23□□□□□ -0.45
CXXC1-211ENST00000589548 WRBO00258 174 aa12.22□□□□□ -0.45
CXXC1-211ENST00000589548 EREGO14944 169 aa12.22□□□□□ -0.45
CXXC1-211ENST00000589548 S100A7P31151 101 aa12.22□□□□□ -0.45
CXXC1-211ENST00000589548 RAP2BP61225 183 aa12.22□□□□□ -0.45
CXXC1-211ENST00000589548 A0A087WTM6 91 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 H3BP45 60 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 CTDSPLO15194 276 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 SYNGR2O43760 224 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 ANXA3P12429 323 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 PLP1P60201 277 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 HAMPP81172 84 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 ICAM4Q14773 271 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 CCDC28AQ8IWP9 274 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 SCGB3A2Q96PL1 93 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 SCP2D1Q9UJQ7 156 aa12.21□□□□□ -0.45
CXXC1-211ENST00000589548 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 RGS5O15539 181 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 HYPMO75409 117 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 MED6O75586 246 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 NXPH4O95158 308 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 IL5P05113 134 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
CXXC1-211ENST00000589548 OR5G3P0C626 314 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 LINC00869P0C866 280 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 SLC25A6P12236 298 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 SPANXN5Q5MJ07 72 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 PATE2Q6UY27 113 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 LRRC20Q8TCA0 184 aa12.2□□□□□ -0.46
CXXC1-211ENST00000589548 CIB3Q96Q77 187 aaPredicted RBP12.2□□□□□ -0.46
CXXC1-211ENST00000589548 PMS2P5A8MQ11 134 aa12.19□□□□□ -0.46
CXXC1-211ENST00000589548 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
CXXC1-211ENST00000589548 ZNF331Q9NQX6 463 aaPredicted RBP12.19□□□□□ -0.46
CXXC1-211ENST00000589548 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 SMCO3A2RU48 225 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 J3KRW8 73 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 J3QL48 77 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 IFNA5P01569 189 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 RPP30P78346 268 aaKnown RBP12.18□□□□□ -0.46
CXXC1-211ENST00000589548 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
CXXC1-211ENST00000589548 IL18Q14116 193 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 CCDC190Q86UF4 302 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 LRTM2Q8N967 370 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
CXXC1-211ENST00000589548 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
CXXC1-211ENST00000589548 SLC17A3O00476 420 aa12.17□□□□□ -0.46
CXXC1-211ENST00000589548 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
CXXC1-211ENST00000589548 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 H3BTX0 84 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 CCNKO75909 580 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 CXCL2P19875 107 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 RABL2BQ9UNT1 228 aa12.16□□□□□ -0.46
CXXC1-211ENST00000589548 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
CXXC1-211ENST00000589548 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 TMEM128Q5BJH2 165 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 Q6ZSN1 163 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 DIRAS2Q96HU8 199 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 ARV1Q9H2C2 271 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
CXXC1-211ENST00000589548 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
CXXC1-211ENST00000589548 GCSHP23434 173 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 VAMP1P23763 118 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 SELENOTP62341 195 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 SPCS2Q15005 226 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 ZNF431Q8TF32 576 aaPredicted RBP12.14□□□□□ -0.47
CXXC1-211ENST00000589548 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
CXXC1-211ENST00000589548 FAM229AH3BQW9 127 aa12.13□□□□□ -0.47
CXXC1-211ENST00000589548 HOXB5P09067 269 aa12.13□□□□□ -0.47
CXXC1-211ENST00000589548 RRAS2P62070 204 aaPredicted RBP12.13□□□□□ -0.47
CXXC1-211ENST00000589548 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
CXXC1-211ENST00000589548 MORN5Q5VZ52 161 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms