RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
NPC1-205ENST00000587163 ZNF503Q96F45 646 aa11.27□□□□□ -0.61
NPC1-205ENST00000587163 SOSTQ9BQB4 213 aa11.27□□□□□ -0.61
NPC1-205ENST00000587163 PARD6GQ9BYG4 376 aaPredicted RBP11.27□□□□□ -0.61
NPC1-205ENST00000587163 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
NPC1-205ENST00000587163 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 H7BYZ3 331 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 OR5G3P0C626 314 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 VAMP1P23763 118 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 PLP1P60201 277 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 RAP2BP61225 183 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 PATE2Q6UY27 113 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 LRRC20Q8TCA0 184 aa11.26□□□□□ -0.61
NPC1-205ENST00000587163 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
NPC1-205ENST00000587163 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
NPC1-205ENST00000587163 STRAPQ9Y3F4 350 aaKnown RBP11.26□□□□□ -0.61
NPC1-205ENST00000587163 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
NPC1-205ENST00000587163 GAGE7O76087 117 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 HOXB5P09067 269 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
NPC1-205ENST00000587163 LINC00869P0C866 280 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPC1-205ENST00000587163 DYNC2LI1Q8TCX1 351 aa11.25□□□□□ -0.61
NPC1-205ENST00000587163 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
NPC1-205ENST00000587163 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
NPC1-205ENST00000587163 CCNKO75909 580 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 SFT2D2O95562 160 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 TNFSF8P32971 234 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 LINC00315P59091 139 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 PPP1R1AQ13522 171 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 Q6ZRN7 208 aaPredicted RBP11.23□□□□□ -0.61
NPC1-205ENST00000587163 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
NPC1-205ENST00000587163 ZNF331Q9NQX6 463 aaPredicted RBP11.23□□□□□ -0.61
NPC1-205ENST00000587163 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
NPC1-205ENST00000587163 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 H3BNG1 76 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 ADAP1O75689 374 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 RLN2P04090 185 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 ANXA7P20073 488 aaKnown RBP11.22□□□□□ -0.61
NPC1-205ENST00000587163 XGP55808 180 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 SELENOTP62341 195 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPC1-205ENST00000587163 ID3Q02535 119 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 ZBTB8BQ8NAP8 495 aaPredicted RBP11.22□□□□□ -0.61
NPC1-205ENST00000587163 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 TMPRSS5Q9H3S3 457 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
NPC1-205ENST00000587163 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 RRAS2P62070 204 aaPredicted RBP11.21□□□□□ -0.61
NPC1-205ENST00000587163 Q6ZTI0 123 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 TRIM63Q969Q1 353 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
NPC1-205ENST00000587163 DMBT1Q9UGM3 2413 aaPredicted RBP11.21□□□□□ -0.61
NPC1-205ENST00000587163 FAT1Q14517 4588 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 A0A096LPF7 62 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 H3BTX0 84 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 J3KRW8 73 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 SLC17A3O00476 420 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
NPC1-205ENST00000587163 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
NPC1-205ENST00000587163 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
NPC1-205ENST00000587163 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 CXCL2P19875 107 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 SLC38A11Q08AI6 406 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 LCN15Q6UWW0 184 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 TOMM5Q8N4H5 51 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 SLC25A21Q9BQT8 299 aaPredicted RBP11.19□□□□□ -0.62
NPC1-205ENST00000587163 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 TNFRSF18Q9Y5U5 241 aa11.19□□□□□ -0.62
NPC1-205ENST00000587163 TRAV12-3A0A0B4J271 114 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 K7EPK0 472 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 SLC50A1Q9BRV3 221 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 MRPS26Q9BYN8 205 aaKnown RBP11.18□□□□□ -0.62
NPC1-205ENST00000587163 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
NPC1-205ENST00000587163 SSSCA1O60232 199 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
NPC1-205ENST00000587163 TEPPQ6URK8 271 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 TMEM14EPQ6UXP3 125 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 S100A7AQ86SG5 101 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 ZNF431Q8TF32 576 aaPredicted RBP11.17□□□□□ -0.62
NPC1-205ENST00000587163 RAB2BQ8WUD1 216 aa11.17□□□□□ -0.62
NPC1-205ENST00000587163 H3BQ15 152 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms