RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ZNF98A6NK75 572 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 SH2D7A6NKC9 451 aaPredicted RBP14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BKO60814 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 IGHV3-23P01764 117 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 AMY1AP04745 511 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BJP06899 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BOP23527 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BBP33778 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 AKR1D1P51857 326 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BDP58876 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BCP62807 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST2H2BEQ16778 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 C15orf32Q32M92 178 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.34□□□□□ -0.11
RETREG3-205ENST00000586870 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 FRZBQ92765 325 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BHQ93079 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 SMIM12Q96EX1 92 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BNQ99877 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 HIST1H2BMQ99879 126 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 ATG101Q9BSB4 218 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 V9GYV3 84 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 COL6A5A8TX70 2615 aa14.34□□□□□ -0.11
RETREG3-205ENST00000586870 TRAV41A0A0B4J266 112 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 ZNF320A2RRD8 509 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 G3V318 75 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 M0QZK8 103 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 HAX1O00165 279 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 TRGC1P0CF51 173 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 UBE2G1P62253 170 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 GNG5P63218 68 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 C19orf54Q5BKX5 351 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 LYPD1Q8N2G4 141 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 LINC00479Q96M42 142 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 RNF114Q9Y508 228 aa14.33□□□□□ -0.11
RETREG3-205ENST00000586870 TRBV19A0A075B6N1 114 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 MRPS12O15235 138 aaKnown RBP14.33□□□□□ -0.12
RETREG3-205ENST00000586870 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 MGST1P10620 155 aaKnown RBP14.33□□□□□ -0.12
RETREG3-205ENST00000586870 NDUFA6P56556 154 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 RPEL1Q2QD12 228 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 LINC01006Q8NI28 216 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 EEF1AKMT3Q96AZ1 226 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 FMC1Q96HJ9 113 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 ATP6V0BQ99437 205 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 C16orf95Q9H693 158 aa14.33□□□□□ -0.12
RETREG3-205ENST00000586870 H3BTX0 84 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 SLC17A3O00476 420 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 TCRAP04437 139 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 HOXA5P20719 270 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 ADMP35318 185 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 C9orf152Q5JTZ5 239 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 FAM231DQ6ZW35 169 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
RETREG3-205ENST00000586870 TRBV7-1A0A0A6YYK4 115 aa14.31□□□□□ -0.12
RETREG3-205ENST00000586870 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
RETREG3-205ENST00000586870 IGF1P05019 195 aa14.31□□□□□ -0.12
RETREG3-205ENST00000586870 BLCAPP62952 87 aa14.31□□□□□ -0.12
RETREG3-205ENST00000586870 IBA57Q5T440 356 aaKnown RBP14.31□□□□□ -0.12
RETREG3-205ENST00000586870 RABAC1Q9UI14 185 aa14.31□□□□□ -0.12
RETREG3-205ENST00000586870 ACTL10Q5JWF8 245 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 CMTM2Q8TAZ6 248 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 GPR82Q96P67 336 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 RNASE7Q9H1E1 156 aaKnown RBP14.3□□□□□ -0.12
RETREG3-205ENST00000586870 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 BMPR1BO00238 502 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 BRI3O95415 125 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 IGHG2P01859 326 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 GPR183P32249 361 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 RPL19P84098 196 aaKnown RBP14.3□□□□□ -0.12
RETREG3-205ENST00000586870 ATP5G2Q06055 141 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 PDE6HQ13956 83 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 LINC00518Q8N0U6 118 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 ZNF414Q96IQ9 312 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 RPH3ALQ9UNE2 315 aa14.3□□□□□ -0.12
RETREG3-205ENST00000586870 TRBV6-1A0A0K0K1D8 114 aa14.29□□□□□ -0.12
RETREG3-205ENST00000586870 S100A8P05109 93 aa14.29□□□□□ -0.12
RETREG3-205ENST00000586870 CLEC3BP05452 202 aa14.29□□□□□ -0.12
RETREG3-205ENST00000586870 RPL7P18124 248 aaKnown RBP14.29□□□□□ -0.12
RETREG3-205ENST00000586870 ZNF702PQ9H963 129 aa14.29□□□□□ -0.12
RETREG3-205ENST00000586870 H3BUA1 57 aa14.28□□□□□ -0.12
RETREG3-205ENST00000586870 CDX1P47902 265 aaPredicted RBP14.28□□□□□ -0.12
RETREG3-205ENST00000586870 SIGLEC15Q6ZMC9 328 aa14.28□□□□□ -0.12
RETREG3-205ENST00000586870 EXOC3-AS1Q8N2X6 119 aa14.28□□□□□ -0.12
RETREG3-205ENST00000586870 CCDC140Q96MF4 163 aa14.28□□□□□ -0.12
RETREG3-205ENST00000586870 MS4A10Q96PG2 267 aa14.28□□□□□ -0.12
RETREG3-205ENST00000586870 GATCO43716 136 aaKnown RBP14.27□□□□□ -0.12
RETREG3-205ENST00000586870 LTAP01374 205 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 RAB9AP51151 201 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 NHLRC2Q8NBF2 726 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 C17orf77Q96MU5 243 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 ZNF747Q9BV97 191 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 MLST8Q9BVC4 326 aa14.27□□□□□ -0.12
RETREG3-205ENST00000586870 CLEC19AQ6UXS0 136 aa14.26□□□□□ -0.13
RETREG3-205ENST00000586870 ZFAND3Q9H8U3 227 aa14.26□□□□□ -0.13
RETREG3-205ENST00000586870 SERTAD4Q9NUC0 356 aa14.26□□□□□ -0.13
RETREG3-205ENST00000586870 TRAPPC1Q9Y5R8 145 aa14.26□□□□□ -0.13
RETREG3-205ENST00000586870 SMIM27A0A1W2PRY6 76 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms