RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 ID1P41134 155 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 PSMB3P49720 205 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 TAS2R45P59539 299 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 UBE2L3P68036 154 aaKnown RBP9.69□□□□□ -0.86
ERBB2-215ENST00000583391 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 IGFL4Q6B9Z1 124 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 LCN15Q6UWW0 184 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 BAP18Q8IXM2 172 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 RPP25LQ8N5L8 163 aaKnown RBP9.69□□□□□ -0.86
ERBB2-215ENST00000583391 LRRC20Q8TCA0 184 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 TMED6Q8WW62 240 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 PAXXQ9BUH6 204 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 RPRMQ9NS64 109 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 TMEM14CQ9P0S9 112 aa9.69□□□□□ -0.86
ERBB2-215ENST00000583391 ISLRO14498 428 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 OR10J4P0C629 311 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 SLC51BQ86UW2 128 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 ACTR3CQ9C0K3 210 aaPredicted RBP9.68□□□□□ -0.86
ERBB2-215ENST00000583391 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 HRH4Q9H3N8 390 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 ZNF586Q9NXT0 402 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 COL7A1Q02388 2944 aa9.68□□□□□ -0.86
ERBB2-215ENST00000583391 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 SEC11BP0C7V7 166 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 HIST1H1EP10412 219 aaKnown RBP9.67□□□□□ -0.86
ERBB2-215ENST00000583391 HLA-DMBP28068 263 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 CMC4P56277 68 aaPredicted RBP9.67□□□□□ -0.86
ERBB2-215ENST00000583391 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 FXYD5Q96DB9 178 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 ZNF503Q96F45 646 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 C20orf173Q96LM9 149 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
ERBB2-215ENST00000583391 CTXND1A0A1B0GTU2 59 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 FRMD6-AS1P0C7T7 363 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 DEFB1P60022 68 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 ZNF726P1Q15940 193 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 GUK1Q16774 197 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 RNF141Q8WVD5 230 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 ZNF331Q9NQX6 463 aaPredicted RBP9.66□□□□□ -0.86
ERBB2-215ENST00000583391 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 NBEAL2Q6ZNJ1 2754 aa9.66□□□□□ -0.86
ERBB2-215ENST00000583391 TRBV19A0A075B6N1 114 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 STAG3L2P0CL84 134 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 PRB4P10163 310 aaPredicted RBP9.65□□□□□ -0.86
ERBB2-215ENST00000583391 FHITP49789 147 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 IQCF2Q8IXL9 164 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 ZNF738Q8NE65 137 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 TGP01266 2768 aa9.65□□□□□ -0.86
ERBB2-215ENST00000583391 MAP1LC3B2A6NCE7 125 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 UMAD1C9J7I0 102 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 F6UB75 175 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 ZNF253O75346 499 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 NDUFB4O95168 129 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 NBEAP1P0C6P0 100 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 FGF8P55075 233 aaPredicted RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 PDE6HQ13956 83 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 EIF5AL1Q6IS14 154 aaKnown RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 STHQ8IWL8 128 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 SAT2Q96F10 170 aaPredicted RBP9.64□□□□□ -0.87
ERBB2-215ENST00000583391 MAP1LC3BQ9GZQ8 125 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 TENM3Q9P273 2699 aa9.64□□□□□ -0.87
ERBB2-215ENST00000583391 A8MZ25 164 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 CXorf1O96002 111 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 GCHFRP30047 84 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 PSG9Q00887 426 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 PSG3Q16557 428 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
ERBB2-215ENST00000583391 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
ERBB2-215ENST00000583391 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
ERBB2-215ENST00000583391 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 DPPA3Q6W0C5 159 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 FOXI2Q6ZQN5 318 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 EXOC3-AS1Q8N2X6 119 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 RPUSD4Q96CM3 377 aaKnown RBP9.62□□□□□ -0.87
ERBB2-215ENST00000583391 SAV1Q9H4B6 383 aaPredicted RBP9.62□□□□□ -0.87
ERBB2-215ENST00000583391 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
ERBB2-215ENST00000583391 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms