RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 ATXN8Q156A1 80 aa13.27□□□□□ -0.29
ERBB2-214ENST00000583038 LINC00311Q8N616 119 aa13.27□□□□□ -0.29
ERBB2-214ENST00000583038 FNDC4Q9H6D8 234 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-214ENST00000583038 DOCK10Q96BY6 2186 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 PCNX1Q96RV3 2341 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 GGTLC3B5MD39 225 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 INSP01308 110 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 RASL10AQ92737 203 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 C3orf79P0CE67 100 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 CEACAM8P31997 349 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-214ENST00000583038 Q8TAT8 98 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 E9PQ18 207 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 M0R2P5 195 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 FCN3O75636 299 aa13.26□□□□□ -0.29
ERBB2-214ENST00000583038 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 TMEM256Q8N2U0 113 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 C11orf44Q8N8P7 122 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 SYS1-DBNDD2H3BUS1 97 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-214ENST00000583038 NSUN5P1Q3KNT7 163 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 NDUFA4L2Q9NRX3 87 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 TRAV12-3A0A0B4J271 114 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 LHFPL4Q7Z7J7 247 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 MEGF9Q9H1U4 602 aa13.25□□□□□ -0.29
ERBB2-214ENST00000583038 SRSF6Q13247 344 aaKnown RBP13.24□□□□□ -0.29
ERBB2-214ENST00000583038 PROK2Q9HC23 129 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 CRIM1Q9NZV1 1036 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 LINC00205P59089 165 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 NDPQ00604 133 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 Q0VG73 95 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 VGLL1Q99990 258 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 FANCMQ8IYD8 2048 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 LINC00158P58513 81 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
ERBB2-214ENST00000583038 LY6G6EA0A0G2JKS1 128 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 CKS1BP61024 79 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 GUSBP1Q15486 140 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 ZNF833PQ6ZTB9 187 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 TMEM75Q8N9X5 138 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 U3KQA8 63 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 MSMBP08118 114 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 BCL6BQ8N143 479 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-214ENST00000583038 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 WFDC12Q8WWY7 111 aa13.23□□□□□ -0.29
ERBB2-214ENST00000583038 RHODO00212 210 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 MST1LQ2TV78 715 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
ERBB2-214ENST00000583038 MLANAQ16655 118 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 TMEM249Q2WGJ8 235 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 LIME1Q9H400 295 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 OVOL3O00110 214 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 IGLV1-44P01699 117 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 TMEM95Q3KNT9 176 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 PYY3Q5JQD4 70 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 KLHL30-AS1Q8NEE0 82 aa13.22□□□□□ -0.29
ERBB2-214ENST00000583038 TEX36Q5VZQ5 186 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 Q6ZR03 302 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 ZC2HC1BQ5TFG8 222 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 ARFGEF3Q5TH69 2177 aa13.21□□□□□ -0.29
ERBB2-214ENST00000583038 IGLV3-9A0A075B6K5 115 aa13.21□□□□□ -0.3
ERBB2-214ENST00000583038 ADCYAP1P18509 176 aa13.21□□□□□ -0.3
ERBB2-214ENST00000583038 LCNL1Q6ZST4 164 aa13.21□□□□□ -0.3
ERBB2-214ENST00000583038 AMN1Q8IY45 258 aa13.2□□□□□ -0.3
ERBB2-214ENST00000583038 JPT2Q9H910 190 aa13.2□□□□□ -0.3
ERBB2-214ENST00000583038 LSM4Q9Y4Z0 139 aaKnown RBP13.2□□□□□ -0.3
ERBB2-214ENST00000583038 LY6G5BQ8NDX9 201 aa13.2□□□□□ -0.3
ERBB2-214ENST00000583038 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
ERBB2-214ENST00000583038 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
ERBB2-214ENST00000583038 PAX9P55771 341 aa13.2□□□□□ -0.3
ERBB2-214ENST00000583038 LY6HO94772 140 aa13.19□□□□□ -0.3
ERBB2-214ENST00000583038 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
ERBB2-214ENST00000583038 LOXP28300 417 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-214ENST00000583038 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
ERBB2-214ENST00000583038 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
ERBB2-214ENST00000583038 IGHV1-69DA0A0B4J2H0 117 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 IGHV1-69P01742 117 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 ERCC8Q13216 396 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 TRPT1Q86TN4 253 aaKnown RBP13.18□□□□□ -0.3
ERBB2-214ENST00000583038 ATP6V0E1O15342 81 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 A0A0U1RRA0 63 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 SIGMAR1Q99720 223 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 SHANK1Q9Y566 2161 aa13.18□□□□□ -0.3
ERBB2-214ENST00000583038 IGLV3-1P01715 115 aa13.17□□□□□ -0.3
ERBB2-214ENST00000583038 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
ERBB2-214ENST00000583038 C17orf58Q2M2W7 97 aa13.17□□□□□ -0.3
ERBB2-214ENST00000583038 HEATR5AQ86XA9 2040 aa13.17□□□□□ -0.3
ERBB2-214ENST00000583038 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
ERBB2-214ENST00000583038 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-214ENST00000583038 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms