RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-217	ENST00000580583	LINC00527	Q9UJ94	153 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	VPREB3	Q9UKI3	123 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NAV2	Q8IVL1	2488 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGHV3OR16-8	A0A075B7F1	116 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TRAV8-1	A0A0A6YYK1	113 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	XKRY2	A2RUG3	117 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CLPSL1	A2RUU4	121 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IZUMO1R	A6ND01	250 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	FBLL1	A6NHQ2	334 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SNURFL	B1AK76	121 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	DIRC3	C9JPN6	131 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583		M0R3E3	92 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CA1	P00915	261 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGLV2-11	P01706	119 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583		P01737	135 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PF4V1	P10720	104 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CBLN1	P23435	193 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	S100A2	P29034	98 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PPIF	P30405	207 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IER3	P46695	156 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CDX1	P47902	265 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MEOX2	P50222	304 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	BLCAP	P62952	87 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CFHR3	Q02985	330 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PSG3	Q16557	428 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	COA6	Q5JTJ3	125 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PRNT	Q86SH4	94 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TMEM183A	Q8IXX5	376 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	HIST3H2BB	Q8N257	126 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ARL6IP6	Q8N6S5	226 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NUDT10	Q8NFP7	164 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	OR4B1	Q8NGF8	309 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TSKU	Q8WUA8	353 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NUDT11	Q96G61	164 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C17orf77	Q96MU5	243 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NOL4L	Q96MY1	436 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SLC50A1	Q9BRV3	221 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MLST8	Q9BVC4	326 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TRAPPC1	Q9Y5R8	145 aa		4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CREBBP	Q92793	2442 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SPG11	Q96JI7	2443 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PTPN13	Q12923	2485 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	USP9Y	O00507	2555 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MED13L	Q71F56	2210 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583		A0A0G2JLM5	398 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TMEM89	A2RUT3	159 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C19orf71	A6NCJ1	209 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NPIPB6	E9PJ23	425 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NDUFA4	O00483	81 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CHEK1	O14757	476 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	BUB3	O43684	328 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGLV1-40	P01703	118 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	HLA-DQA1	P01909	254 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TMEM95	Q3KNT9	176 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	FAM209B	Q5JX69	171 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CYB5R2	Q6BCY4	276 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MRPL54	Q6P161	138 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	RASL11A	Q6T310	242 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CIART	Q8N365	385 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TEX29	Q8N6K0	151 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	WIPF2	Q8TF74	440 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	DAZAP1	Q96EP5	407 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NEU1	Q99519	415 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C12orf57	Q99622	126 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GNB1L	Q9BYB4	327 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MRPL18	Q9H0U6	180 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NAT8B	Q9UHF3	227 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PSG8	Q9UQ74	426 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZFP30	Q9Y2G7	519 aa		4.87	□□□□□ -1.63
PPP4R1-217	ENST00000580583	POLQ	O75417	2590 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CR1	P17927	2039 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IFITM10	A6NMD0	228 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF785	A8K8V0	405 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583		A8MWL6	223 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF207	O43670	478 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SPINK4	O60575	86 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGKV2D-40	P01614	121 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TRBV12-3	P01733	135 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGHV3-11	P01762	117 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGHG4	P01861	327 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CT45A10	P0DMU9	189 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SLC35B1	P78383	322 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PDZD11	Q5EBL8	140 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GFI1B	Q5VTD9	330 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C16orf54	Q6UWD8	224 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583		Q6YL49	198 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TMEM136	Q6ZRR5	245 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ATP5L2	Q7Z4Y8	100 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MRPL53	Q96EL3	112 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZC2HC1A	Q96GY0	325 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NDFIP1	Q9BT67	221 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GPR61	Q9BZJ8	451 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PRSS22	Q9GZN4	317 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NPFFR1	Q9GZQ6	430 aa		4.86	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GFRA4	Q9GZZ7	299 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms