RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 CXCL3P19876 107 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 RAP2BP61225 183 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 MRPS10P82664 201 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 SCGB3A2Q96PL1 93 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 PRRT1Q99946 306 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 MDFICQ9P1T7 246 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
CDK5RAP3-216ENST00000579853 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 A0A087WTM6 91 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 A0A096LPF7 62 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 H3BRN7 92 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 ANXA3P12429 323 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 GCSHP23434 173 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 CIB3Q96Q77 187 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 EXTL2Q9UBQ6 330 aa8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-216ENST00000579853 A0A087X0K7 114 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 MED6O75586 246 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 NXPH4O95158 308 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 SHANK2-AS3Q9BTD1 123 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 HIGD1AQ9Y241 93 aa8.34□□□□□ -1.07
CDK5RAP3-216ENST00000579853 DUXBA0A1W2PPF3 345 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 AKAIN1P0CW23 69 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 CXCL2P19875 107 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 GATA2P23769 480 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 VBP1P61758 197 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 NCS1P62166 190 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 AKR1C1Q04828 323 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 FAAP20Q6NZ36 180 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TMPRSS5Q9H3S3 457 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 DNAH8Q96JB1 4490 aa8.33□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 HYPMO75409 117 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 IAPPP10997 89 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SELENOTP62341 195 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SCP2D1Q9UJQ7 156 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
CDK5RAP3-216ENST00000579853 A0A087WXM4 84 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PRSS46E5RG02 174 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PITX3O75364 302 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 IL5P05113 134 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SLC25A6P12236 298 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PLP1P60201 277 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SLAQ13239 276 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 GFI1BQ5VTD9 330 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TMEM182Q6ZP80 229 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 Q6ZTI0 123 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ACOT7LQ6ZUV0 252 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 CCDC190Q86UF4 302 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 CLVS1Q8IUQ0 354 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 OR51S1Q8NGJ8 323 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SLC50A1Q9BRV3 221 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PRR13Q9NZ81 148 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LY96Q9Y6Y9 160 aa8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
CDK5RAP3-216ENST00000579853 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 OR5G3P0C626 314 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ZNF680Q8NEM1 530 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SMIM4Q8WVI0 70 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 FUNDC2Q9BWH2 189 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ZNF331Q9NQX6 463 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 RABL2AQ9UBK7 228 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 RABL2BQ9UNT1 228 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TNFRSF18Q9Y5U5 241 aa8.3□□□□□ -1.08
CDK5RAP3-216ENST00000579853 NPIPB6E9PJ23 425 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PAX4O43316 350 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SYNGR2O43760 224 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LINC00869P0C866 280 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ANXA7P20073 488 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 EVI2AP22794 236 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LEPP41159 167 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 C4orf46Q504U0 113 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 CYP2G1PQ6ZSU1 146 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 FUT9Q9Y231 359 aa8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 STRAPQ9Y3F4 350 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-216ENST00000579853 IGLV5-52A0A0A0MRZ9 124 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SMCO3A2RU48 225 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PMS2P5A8MQ11 134 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 WRBO00258 174 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 ATP6V1G2O95670 118 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms