RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 MAP2P11137 1827 aaKnown RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 TRBV20-1A0A075B6N2 111 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 A0A087WWC5 75 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 C7orf66A4D0T2 115 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF860A6NHJ4 632 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 MCRIP1C9JLW8 97 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 M0R1X1 148 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 SYNGR2O43760 224 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 COX7A2P2O60397 106 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 HYPMO75409 117 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 SOD1P00441 154 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 LTAP01374 205 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 IGKV1-5P01602 117 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 SRP19P09132 144 aaKnown RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 COX7A1P24310 79 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 CRISP3P54108 245 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 HERVK_113P61574 105 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 HBBP68871 147 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 EIF4EBP1Q13541 118 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 ADIRFQ15847 76 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 TMEM155Q4W5P6 130 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 LINC00173Q6ZV60 143 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 LSM10Q969L4 123 aaKnown RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 RBMXL1Q96E39 390 aaKnown RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 ST20Q9HBF5 79 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 AIG1Q9NVV5 245 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 DNAJC15Q9Y5T4 150 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 SLC25A15Q9Y619 301 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 PLEKHH2Q8IVE3 1493 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 CDK13Q14004 1512 aaKnown RBP2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 DIP2BQ9P265 1576 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 SETBP1Q9Y6X0 1596 aa2.31□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF638Q14966 1978 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 NUP205Q92621 2012 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 A0A1B0GW54 56 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 KRTAP4-16G5E9R7 235 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 SSSCA1O60232 199 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 PROSCO94903 275 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 HLA-DPB1P04440 258 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 TRGC1P0CF51 173 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF705DP0CH99 300 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 SCGB1C2P0DMR2 95 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 COX7CP15954 63 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 HINT1P49773 126 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF136P52737 540 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 TAS2R45P59539 299 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 GABARAPL2P60520 117 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 RPL23P62829 140 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 CCL20P78556 96 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 RBMY1FQ15415 496 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 BVES-AS1Q5T3Y7 98 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 LGALS9CQ6DKI2 356 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 DPPA3Q6W0C5 159 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZFP2Q6ZN57 461 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 H2AFVQ71UI9 128 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 GPHB5Q86YW7 130 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 Q8N2B8 174 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 MORN4Q8NDC4 146 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF555Q8NEP9 628 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 WFDC11Q8NEX6 87 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 OR8A1Q8NGG7 326 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 OR5H2Q8NGV7 314 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 STAG3L4Q8TBR4 150 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 S100A16Q96FQ6 103 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 SLC35B3Q9H1N7 401 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ZNF492Q9P255 531 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 LINC00588Q9Y4M8 146 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 F11RQ9Y624 299 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 BLMP54132 1417 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 RPRD2Q5VT52 1461 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 SYCP2Q9BX26 1530 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ADGRB1O14514 1584 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 TARBP1Q13395 1621 aaKnown RBP2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 CROCC2H7BZ55 1655 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 PPLO60437 1756 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 SBF2Q86WG5 1849 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 ARHGAP21Q5T5U3 1957 aa2.3□□□□□ -2.04
TRAPPC8-205ENST00000578658 MYH7BA7E2Y1 1941 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 MARF1Q9Y4F3 1742 aaKnown RBP2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 ABCA6Q8N139 1617 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 URB2Q14146 1524 aaKnown RBP2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 ARAP3Q8WWN8 1544 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 IQSEC2Q5JU85 1478 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 PXDNQ92626 1479 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 ANKRD50Q9ULJ7 1429 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 IGLV4-69A0A075B6H9 119 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 IGHV3-64DA0A0J9YX35 117 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 TRBV7-7A0A0K0K1E9 115 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 C7orf77A4D0Y5 90 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 BUB1B-PAK6H3BSN5 160 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 C19orf84I3L1E1 186 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 TMEM256-PLSCR3K7ERE1 68 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 M0R129 80 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 PLA2G10O15496 165 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 SNCGO76070 127 aa2.29□□□□□ -2.04
TRAPPC8-205ENST00000578658 IGLV2-8P01709 118 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms