RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 ZNF705EA8MWA4 302 aaPredicted RBP6.07□□□□□ -1.44
COPS3-215ENST00000578317 OVOL1O14753 267 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 CHEK1O14757 476 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 APOHP02749 345 aaPredicted RBP6.07□□□□□ -1.44
COPS3-215ENST00000578317 FOLR2P14207 255 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 SPATA31B1PQ5VZV4 182 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 FAM122CQ6P4D5 195 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 C16orf54Q6UWD8 224 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 PQLC2Q6ZP29 291 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 BPIFA4PQ86YQ2 179 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 FAM213BQ8TBF2 198 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 GRAMD2BQ96HH9 432 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 RHPN1-AS1Q9BWJ2 59 aa6.07□□□□□ -1.44
COPS3-215ENST00000578317 WNK1Q9H4A3 2382 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 IGHV3OR16-8A0A075B7F1 116 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 TEX46H3BTG2 121 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 MRPS12O15235 138 aaKnown RBP6.06□□□□□ -1.44
COPS3-215ENST00000578317 CXorf1O96002 111 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 HBE1P02100 147 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 CSN3P07498 182 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 NMBP08949 121 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 RPL7P18124 248 aaKnown RBP6.06□□□□□ -1.44
COPS3-215ENST00000578317 RAB14P61106 215 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 KHDC3LQ587J8 217 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 CLLU1Q5K131 121 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 ADAMTSL5Q6ZMM2 481 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 OR8I2Q8N0Y5 310 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 SFT2D1Q8WV19 159 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 GLMPQ8WWB7 406 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 ELOVL1Q9BW60 279 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 SCRT1Q9BWW7 348 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 SLC25A2Q9BXI2 301 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 OR51M1Q9H341 326 aa6.06□□□□□ -1.44
COPS3-215ENST00000578317 CMYA5Q8N3K9 4069 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 TRAV5A0A0B4J249 113 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 MAP1LC3B2A6NCE7 125 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 HELTA6NFD8 242 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 M0QZ24 198 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 ZNF207O43670 478 aaKnown RBP6.05□□□□□ -1.44
COPS3-215ENST00000578317 HIST1H1EP10412 219 aaKnown RBP6.05□□□□□ -1.44
COPS3-215ENST00000578317 MEOX2P50222 304 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 SSX7Q7RTT5 188 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 ZNF503Q96F45 646 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 MAP1LC3BQ9GZQ8 125 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 HRH4Q9H3N8 390 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 SLC25A22Q9H936 323 aa6.05□□□□□ -1.44
COPS3-215ENST00000578317 TRGV11A0A075B6L2 103 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 IGLC2P0DOY2 106 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 GP9P14770 177 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 GALR1P47211 349 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 PSMB3P49720 205 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 INSL3P51460 131 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 GUK1Q16774 197 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 DEFB114Q30KQ6 69 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 LEMD1Q68G75 181 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 Q6ZSN1 163 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 FXYD5Q96DB9 178 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 PAXXQ9BUH6 204 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 TMEM167BQ9NRX6 74 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 SMAD5-AS1Q9Y6J3 95 aa6.04□□□□□ -1.44
COPS3-215ENST00000578317 A0A087X0K7 114 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 HMGB3O15347 200 aaKnown RBP6.03□□□□□ -1.44
COPS3-215ENST00000578317 OR7C2O60412 319 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 ZNF253O75346 499 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 NBEAP1P0C6P0 100 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 ARL14EPLP0DKL9 152 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 GCHFRP30047 84 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 PPT1P50897 306 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 PDE6HQ13956 83 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 SAMD13Q5VXD3 122 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 SIGLEC15Q6ZMC9 328 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 LYPD1Q8N2G4 141 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 C17orf77Q96MU5 243 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 MCRIP2Q9BUT9 160 aaKnown RBP6.03□□□□□ -1.44
COPS3-215ENST00000578317 MLXQ9UH92 298 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 ARL2-SNX15V9GYD0 113 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 TRBV19A0A075B6N1 114 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 IGHV3OR16-13A0A075B7E8 117 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 IGHV3-49A0A0A0MS15 119 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 IGHV3-74A0A0B4J1X5 117 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 TRAV2A0A0B4J234 112 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 IGHV3-66A0A0C4DH42 116 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 H3BQ15 152 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 EDN2P20800 178 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 TAGLN2P37802 199 aaKnown RBP6.03□□□□□ -1.44
COPS3-215ENST00000578317 CCL20P78556 96 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 TCF24Q7RTU0 167 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 OR2K2Q8NGT1 345 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 SPATA3Q8NHX4 192 aa6.03□□□□□ -1.44
COPS3-215ENST00000578317 NKX6-2Q9C056 277 aaPredicted RBP6.03□□□□□ -1.44
COPS3-215ENST00000578317 MED9Q9NWA0 146 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms