RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 PAXXQ9BUH6 204 aa8.43□□□□□ -1.06
TRAPPC8-204ENST00000578252 OR51M1Q9H341 326 aa8.43□□□□□ -1.06
TRAPPC8-204ENST00000578252 NRN1Q9NPD7 142 aa8.43□□□□□ -1.06
TRAPPC8-204ENST00000578252 TRAV5A0A0B4J249 113 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 MAP1LC3B2A6NCE7 125 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF785A8K8V0 405 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 DNASE2O00115 360 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 MRPS12O15235 138 aaKnown RBP8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 UBE2L3P68036 154 aaKnown RBP8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 BLOC1S1P78537 153 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 PDE6HQ13956 83 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 LCN15Q6UWW0 184 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF680Q8NEM1 530 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 MBD3L1Q8WWY6 194 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 MAP1LC3BQ9GZQ8 125 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 UBQLN2Q9UHD9 624 aa8.42□□□□□ -1.06
TRAPPC8-204ENST00000578252 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF705EA8MWA4 302 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF253O75346 499 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 HBE1P02100 147 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 ARL14EPLP0DKL9 152 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 MS4A6AQ9H2W1 248 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 TMEM167BQ9NRX6 74 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 CLEC5AQ9NY25 188 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
TRAPPC8-204ENST00000578252 IGKV3-7A0A075B6H7 116 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 K7EQG2 157 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 ISLRO14498 428 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 HMGB3O15347 200 aaKnown RBP8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 PYYP10082 97 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 ID1P41134 155 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 PSMB3P49720 205 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 FHITP49789 147 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 PPT1P50897 306 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 ZNF767PQ75MW2 155 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 SFT2D1Q8WV19 159 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 SLC50A1Q9BRV3 221 aa8.4□□□□□ -1.06
TRAPPC8-204ENST00000578252 NOTCH3Q9UM47 2321 aa8.4□□□□□ -1.07
TRAPPC8-204ENST00000578252 TRBV19A0A075B6N1 114 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 OR10J4P0C629 311 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 GCHFRP30047 84 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 SNRPD3P62318 126 aaKnown RBP8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 PSG9Q00887 426 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 IQCF2Q8IXL9 164 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 LYPD1Q8N2G4 141 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 SUN5Q8TC36 379 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF503Q96F45 646 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 MGAM2Q2M2H8 2515 aa8.39□□□□□ -1.07
TRAPPC8-204ENST00000578252 H3BQ15 152 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 SOCS3O14543 225 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 TFPI2P48307 235 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 GTSCR1Q86UQ5 136 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF331Q9NQX6 463 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF586Q9NXT0 402 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 PRELID1Q9Y255 219 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
TRAPPC8-204ENST00000578252 G3V4G9 280 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 IFNA1P01562 189 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 FGF8P55075 233 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 RAB14P61106 215 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 C17orf77Q96MU5 243 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 SORL1Q92673 2214 aa8.37□□□□□ -1.07
TRAPPC8-204ENST00000578252 A0A1W2PRE2 83 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 NDUFB4O95168 129 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 PMS2P11Q13670 270 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 MANBALQ9NQG1 85 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 NBEAL1Q6ZS30 2694 aa8.36□□□□□ -1.07
TRAPPC8-204ENST00000578252 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 H3BTX0 84 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 SLC17A3O00476 420 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms