RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 LRTM2Q8N967 370 aa8.25□□□□□ -1.09
CDH8-202ENST00000577228 OR8A1Q8NGG7 326 aa8.25□□□□□ -1.09
CDH8-202ENST00000577228 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
CDH8-202ENST00000577228 SHANK2-AS3Q9BTD1 123 aa8.25□□□□□ -1.09
CDH8-202ENST00000577228 HIGD1AQ9Y241 93 aa8.25□□□□□ -1.09
CDH8-202ENST00000577228 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 NAP1L6A6NFF2 107 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 H3BP45 60 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 LYRM1O43325 122 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 IL5P05113 134 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 HTN1P15515 57 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 CYP2G1PQ6ZSU1 146 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 TMEM144Q7Z5S9 345 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 Q8N1X5 172 aa8.24□□□□□ -1.09
CDH8-202ENST00000577228 STRAPQ9Y3F4 350 aaKnown RBP8.24□□□□□ -1.09
CDH8-202ENST00000577228 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
CDH8-202ENST00000577228 HYPMO75409 117 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 OR5G3P0C626 314 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 CXCL3P19876 107 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 ASAH1Q13510 395 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 PSG3Q16557 428 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 ZNF493Q6ZR52 646 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 LRRC20Q8TCA0 184 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 Q9H8V8 135 aa8.23□□□□□ -1.09
CDH8-202ENST00000577228 NOP10Q9NPE3 64 aaKnown RBP8.23□□□□□ -1.09
CDH8-202ENST00000577228 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 A0A087X0K7 114 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 CENPXA8MT69 81 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 NDUFB6O95139 128 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 SFT2D2O95562 160 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 HOXB5P09067 269 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 LINC00869P0C866 280 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 CDKN1BP46527 198 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 PLP1P60201 277 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 PPP1R1AQ13522 171 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 S100A7AQ86SG5 101 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 OR10J6PQ8NGY7 276 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
CDH8-202ENST00000577228 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
CDH8-202ENST00000577228 RPUSD4Q96CM3 377 aaKnown RBP8.22□□□□□ -1.09
CDH8-202ENST00000577228 GNPNAT1Q96EK6 184 aaPredicted RBP8.22□□□□□ -1.09
CDH8-202ENST00000577228 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 SLC25A21Q9BQT8 299 aaPredicted RBP8.22□□□□□ -1.09
CDH8-202ENST00000577228 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 FLVCR2Q9UPI3 526 aa8.22□□□□□ -1.09
CDH8-202ENST00000577228 TRAV26-1A0A087WT03 109 aa8.21□□□□□ -1.1
CDH8-202ENST00000577228 PRB4P10163 310 aaPredicted RBP8.21□□□□□ -1.1
CDH8-202ENST00000577228 SELENOTP62341 195 aa8.21□□□□□ -1.1
CDH8-202ENST00000577228 OR5I1Q13606 314 aa8.21□□□□□ -1.1
CDH8-202ENST00000577228 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
CDH8-202ENST00000577228 A0A0J9YY99 117 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 H7BYZ3 331 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 ADAP1O75689 374 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 M6PRP20645 277 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 ZNF503Q96F45 646 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 Q9H3A6 140 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 PSENENQ9NZ42 101 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 RNF24Q9Y225 148 aa8.2□□□□□ -1.1
CDH8-202ENST00000577228 TCRBP04435 133 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 CXCL2P19875 107 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
CDH8-202ENST00000577228 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
CDH8-202ENST00000577228 POLR2GP62487 172 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH8-202ENST00000577228 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 CCDC28AQ8IWP9 274 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 ARL6Q9H0F7 186 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 C20orf85Q9H1P6 137 aa8.19□□□□□ -1.1
CDH8-202ENST00000577228 FAM240BA0A1B0GVZ2 78 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 A0A1W2PPQ1 181 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 PMS2P5A8MQ11 134 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
CDH8-202ENST00000577228 SSSCA1O60232 199 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 CCNKO75909 580 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 GAGE7O76087 117 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 RLN2P04090 185 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 BTF3P20290 206 aaKnown RBP8.18□□□□□ -1.1
CDH8-202ENST00000577228 DLK1P80370 383 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 ID3Q02535 119 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 KIR3DS1Q14943 382 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 PATE2Q6UY27 113 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 NRARPQ7Z6K4 114 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 SLC50A1Q9BRV3 221 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
CDH8-202ENST00000577228 ARV1Q9H2C2 271 aa8.18□□□□□ -1.1
CDH8-202ENST00000577228 ZNF331Q9NQX6 463 aaPredicted RBP8.18□□□□□ -1.1
CDH8-202ENST00000577228 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
CDH8-202ENST00000577228 TRAV6A0A075B6T7 132 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms