RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
CLDN7-208ENST00000575313 MAP1LC3BQ9GZQ8 125 aa13.37□□□□□ -0.27
CLDN7-208ENST00000575313 PRKDCP78527 4128 aaKnown RBP13.37□□□□□ -0.27
CLDN7-208ENST00000575313 A8MZ25 164 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 CD7P09564 240 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 PYYP10082 97 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 PQLC2Q6ZP29 291 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 B9D2Q9BPU9 175 aa13.36□□□□□ -0.27
CLDN7-208ENST00000575313 IGKV3-7A0A075B6H7 116 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 CXorf1O96002 111 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 SNRPCP09234 159 aaKnown RBP13.35□□□□□ -0.27
CLDN7-208ENST00000575313 OR10J4P0C629 311 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 ARL14EPLP0DKL9 152 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 IGHV4-30-4P0DP06 118 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 ATF4P18848 351 aaPredicted RBP13.35□□□□□ -0.27
CLDN7-208ENST00000575313 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
CLDN7-208ENST00000575313 LRRC20Q8TCA0 184 aa13.35□□□□□ -0.27
CLDN7-208ENST00000575313 SAT2Q96F10 170 aaPredicted RBP13.35□□□□□ -0.27
CLDN7-208ENST00000575313 TRAV2A0A0B4J234 112 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 H3BQ15 152 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 IGLC2P0DOY2 106 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 HIST1H1EP10412 219 aaKnown RBP13.34□□□□□ -0.27
CLDN7-208ENST00000575313 GCHFRP30047 84 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 ZNF767PQ75MW2 155 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 GBGT1Q8N5D6 347 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 C17orf77Q96MU5 243 aa13.34□□□□□ -0.27
CLDN7-208ENST00000575313 A0A087X0K7 114 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 A0A1B0GV50 99 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 OR11H12B2RN74 326 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 H3BTX0 84 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 NBEAP1P0C6P0 100 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
CLDN7-208ENST00000575313 UBE2L3P68036 154 aaKnown RBP13.33□□□□□ -0.28
CLDN7-208ENST00000575313 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 FAM110AQ9BQ89 295 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 TMPRSS5Q9H3S3 457 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 TUBA4BQ9H853 241 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.28
CLDN7-208ENST00000575313 TRAV1-1A0A0B4J248 108 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 TEX46H3BTG2 121 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 DNASE2O00115 360 aaPredicted RBP13.32□□□□□ -0.28
CLDN7-208ENST00000575313 HBE1P02100 147 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 FRMD6-AS1P0C7T7 363 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 TFPI2P48307 235 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 GUK1Q16774 197 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 WFDC3Q8IUB2 231 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 BLNKQ8WV28 456 aa13.32□□□□□ -0.28
CLDN7-208ENST00000575313 PCNPQ8WW12 178 aaKnown RBP13.32□□□□□ -0.28
CLDN7-208ENST00000575313 TRBV19A0A075B6N1 114 aa13.31□□□□□ -0.28
CLDN7-208ENST00000575313 MEOX2P50222 304 aa13.31□□□□□ -0.28
CLDN7-208ENST00000575313 DEFB125Q8N687 156 aa13.31□□□□□ -0.28
CLDN7-208ENST00000575313 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
CLDN7-208ENST00000575313 CCL20P78556 96 aa13.3□□□□□ -0.28
CLDN7-208ENST00000575313 SUN5Q8TC36 379 aa13.3□□□□□ -0.28
CLDN7-208ENST00000575313 DCANP1Q8TF63 244 aa13.3□□□□□ -0.28
CLDN7-208ENST00000575313 K7EQG2 157 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 NMBP08949 121 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 NHLRC4P0CG21 123 aaPredicted RBP13.29□□□□□ -0.28
CLDN7-208ENST00000575313 RAB14P61106 215 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 ODF3L2Q3SX64 289 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 WFDC10AQ9H1F0 79 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 SRD5A3Q9H8P0 318 aa13.29□□□□□ -0.28
CLDN7-208ENST00000575313 SLC17A3O00476 420 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 SOCS3O14543 225 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 ZNF253O75346 499 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 NDUFB4O95168 129 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 PSMB3P49720 205 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 PDE6HQ13956 83 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 LYPD6BQ8NI32 183 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
CLDN7-208ENST00000575313 RGS13O14921 159 aa13.27□□□□□ -0.29
CLDN7-208ENST00000575313 ID1P41134 155 aa13.27□□□□□ -0.29
CLDN7-208ENST00000575313 RANP62826 216 aaKnown RBP13.27□□□□□ -0.29
CLDN7-208ENST00000575313 IGFL4Q6B9Z1 124 aa13.27□□□□□ -0.29
CLDN7-208ENST00000575313 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
CLDN7-208ENST00000575313 ZNF331Q9NQX6 463 aaPredicted RBP13.27□□□□□ -0.29
CLDN7-208ENST00000575313 TRAV8-2A0A0B4J237 113 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 PPT1P50897 306 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 UBE2G2P60604 165 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 PSG9Q00887 426 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 LYPD1Q8N2G4 141 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 FAM24BQ8N5W8 94 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
CLDN7-208ENST00000575313 ISLRO14498 428 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 CLLU1Q5K131 121 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 LINC00322Q6ZN03 302 aaPredicted RBP13.25□□□□□ -0.29
CLDN7-208ENST00000575313 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 ASCL2Q99929 193 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 Q9H3A6 140 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 GNG13Q9P2W3 67 aa13.25□□□□□ -0.29
CLDN7-208ENST00000575313 A0A1W2PRE2 83 aa13.24□□□□□ -0.29
CLDN7-208ENST00000575313 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms