RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
RPA1-207ENST00000574049 CLEC19AQ6UXS0 136 aa6.12□□□□□ -1.43
RPA1-207ENST00000574049 ASCL4Q6XD76 172 aa6.12□□□□□ -1.43
RPA1-207ENST00000574049 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
RPA1-207ENST00000574049 JKAMPQ9P055 326 aa6.12□□□□□ -1.43
RPA1-207ENST00000574049 YPEL1O60688 119 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 MT-ND6P03923 174 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 SELENOTP62341 195 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 GAGE1Q13065 139 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 DNM1P46Q6ZS02 220 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 EXOC3-AS1Q8N2X6 119 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 ORAOV1Q8WV07 137 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 YPEL2Q96QA6 119 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 RPUSD1Q9UJJ7 312 aaKnown RBP6.11□□□□□ -1.43
RPA1-207ENST00000574049 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 SP5Q6BEB4 398 aaPredicted RBP6.11□□□□□ -1.43
RPA1-207ENST00000574049 PPP1R27Q86WC6 154 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 OR1N2Q8NGR9 330 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 PSMG3Q9BT73 122 aaPredicted RBP6.11□□□□□ -1.43
RPA1-207ENST00000574049 IL36BQ9NZH7 164 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 H3BVH4 76 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 UPK2O00526 184 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 SMIM17P0DL12 118 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 RPL7P18124 248 aaKnown RBP6.11□□□□□ -1.43
RPA1-207ENST00000574049 DNLZQ5SXM8 178 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 OR52E5Q8NH55 327 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 C20orf144Q9BQM9 153 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 GGTLC1Q9BX51 225 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 LINC00312Q9Y6C7 94 aa6.11□□□□□ -1.43
RPA1-207ENST00000574049 TRAV9-2A0A087WT02 112 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 C15orf61A6NNL5 157 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TMEM178BH3BS89 294 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 J3QL48 77 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 FAM106CPP0CH98 169 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 ERVK11-1P61568 191 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 FAM74A4Q5TZK3 123 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 HAPLN4Q86UW8 402 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 LRTM2Q8N967 370 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TMEM133Q9H2Q1 129 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 YTHDF2Q9Y5A9 579 aaKnown RBP6.1□□□□□ -1.43
RPA1-207ENST00000574049 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.1□□□□□ -1.43
RPA1-207ENST00000574049 M0R3E3 92 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 SCGB1C2P0DMR2 95 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 Q6ZSR3 168 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 ZNF329Q86UD4 541 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 CCL19Q99731 98 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 WDR83OSQ9Y284 106 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 ANKRD17O75179 2603 aaKnown RBP6.1□□□□□ -1.43
RPA1-207ENST00000574049 A0A1B0GW64 132 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 C15orf62A8K5M9 175 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 A8MWL6 223 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TYMSP04818 313 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 GPX1P07203 203 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 IGLC2P0DOY2 106 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 RPL15P61313 204 aaKnown RBP6.1□□□□□ -1.43
RPA1-207ENST00000574049 OSR1Q8TAX0 266 aaPredicted RBP6.1□□□□□ -1.43
RPA1-207ENST00000574049 MGST2Q99735 147 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 AGMATQ9BSE5 352 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TACC2O95359 2948 aa6.1□□□□□ -1.43
RPA1-207ENST00000574049 TRAV8-6A0A0B4J262 113 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 CORTO00230 105 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 SPRY2O43597 315 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 GATA4P43694 442 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 UTF1Q5T230 341 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 CCDC144NLQ6NUI1 221 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 LCNL1Q6ZST4 164 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 ZNF502Q8TBZ5 544 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 TRAV30A0A087WSZ9 112 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 PMS2P5A8MQ11 134 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 HLA-DRB1P01911 266 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 CFPP27918 469 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 NDPQ00604 133 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 C2orf83Q53S99 150 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 Q6ZPA2 131 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 GAFA1Q96PS6 74 aa6.09□□□□□ -1.43
RPA1-207ENST00000574049 SPENQ96T58 3664 aaKnown RBP6.09□□□□□ -1.43
RPA1-207ENST00000574049 TRAV40A0A0B4J280 105 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 TMEM189A5PLL7 270 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 C9JCJ5 164 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 NPIPB11E5RHQ5 1161 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 M0R381 172 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 SAP30O75446 220 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 NCR2O95944 276 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 TRGV3P03979 118 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 CKS2P33552 79 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 TMEM144Q7Z5S9 345 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 CIARTQ8N365 385 aaPredicted RBP6.09□□□□□ -1.44
RPA1-207ENST00000574049 OR2K2Q8NGT1 345 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 MBD3L1Q8WWY6 194 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 SCRT1Q9BWW7 348 aa6.09□□□□□ -1.44
RPA1-207ENST00000574049 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms