RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 MAXP61244 160 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 HIST1H1AQ02539 215 aaPredicted RBP1.06□□□□□ -2.24
CHD3-217ENST00000574022 ZNF846Q147U1 533 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 CDK5R1Q15078 307 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 ZNF181Q2M3W8 571 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 HSD17B12Q53GQ0 312 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 TMEM244Q5VVB8 128 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 C9orf163Q8N9P6 203 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 MORN4Q8NDC4 146 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 OR4S1Q8NGB4 309 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 OR5D14Q8NGL3 314 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 OR2T35Q8NGX2 323 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 NAT14Q8WUY8 206 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 DIRC1Q969H9 104 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 MAGOHBQ96A72 148 aaKnown RBP1.06□□□□□ -2.24
CHD3-217ENST00000574022 TXNDC17Q9BRA2 123 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 BANF2Q9H503 90 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 TAF9BQ9HBM6 251 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 NIT2Q9NQR4 276 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 OR5AC2Q9NZP5 309 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 U3KQ87 197 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 MYLKQ15746 1914 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 SHROOM3Q8TF72 1996 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 CCDC171Q6TFL3 1326 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 RFX7Q2KHR2 1363 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 DISP1Q96F81 1524 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 SCN8AQ9UQD0 1980 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 A0A096LPI6 279 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 J3QR89 54 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 SULT1C4O75897 302 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 IGKV4-1P06312 121 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 TPT1P13693 172 aaKnown RBP1.05□□□□□ -2.24
CHD3-217ENST00000574022 FOXA3P55318 350 aaPredicted RBP1.05□□□□□ -2.24
CHD3-217ENST00000574022 NCS1P62166 190 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 LSM3P62310 102 aaKnown RBP1.05□□□□□ -2.24
CHD3-217ENST00000574022 MRPS36P82909 103 aaKnown RBP1.05□□□□□ -2.24
CHD3-217ENST00000574022 KRTAP13-3Q3SY46 172 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 TMEM14EPQ6UXP3 125 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 BRD3OSQ6XYD6 125 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 LINC00311Q8N616 119 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 Q8N814 137 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 TMEM254Q8TBM7 123 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 SPACA4Q8TDM5 124 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 MUCL1Q96DR8 90 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 HYLS1Q96M11 299 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 TTTY12Q9BZ98 90 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 TPRKBQ9Y3C4 175 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 WDR7Q9Y4E6 1490 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
CHD3-217ENST00000574022 STRCP1A6NGW2 1772 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 COL11A1P12107 1806 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 TRAV14DV4A0A0A6YYC5 116 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 TRAV12-1A0A0B4J245 112 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 LOC107986453A0A1B0GWG9 222 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 hDV103S1A0JD37 113 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 C2orf70A6NJV1 201 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 B4DSR2 109 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 K7EP13 123 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 UQCRQO14949 82 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 SMIM24O75264 130 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 IGLV1-51P01701 117 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 TCRAP04437 139 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 SAA1P0DJI8 122 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 BRS3P32247 399 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 CDK6Q00534 326 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 Q1T7F1 81 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 DEFB113Q30KQ7 82 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 GLYATL3Q5SZD4 288 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 LCE1EQ5T753 118 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 C1orf134Q5TEV5 83 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 RPL13AP3Q6NVV1 102 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 HAGHLQ6PII5 290 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 MMGT1Q8N4V1 131 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 SFT2D1Q8WV19 159 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 CLEC2BQ92478 149 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 RAB37Q96AX2 223 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 OR4C12Q96R67 309 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 NCKAP5O14513 1909 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 DISP2A7MBM2 1401 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 TNS3Q68CZ2 1445 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 PRG4Q92954 1404 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 COL1A1P02452 1464 aaPredicted RBP1.04□□□□□ -2.24
CHD3-217ENST00000574022 COL4A5P29400 1685 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 USP54Q70EL1 1684 aa1.04□□□□□ -2.24
CHD3-217ENST00000574022 ZFHX2Q9C0A1 2572 aaPredicted RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 CUL9Q8IWT3 2517 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 TCRBV4S1A1TA0A5B7 111 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 CCDC160A6NGH7 325 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 E7EUB6 86 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 J3QRE1 110 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 K7ERU9 68 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 TPST1O60507 370 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 TRACP01848 142 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 HBDP02042 147 aa1.03□□□□□ -2.24
CHD3-217ENST00000574022 SLC25A5P05141 298 aaKnown RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 HIST1H1BP16401 226 aaKnown RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 ZNF93P35789 620 aaPredicted RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 DSCR4P56555 118 aaPredicted RBP1.03□□□□□ -2.24
CHD3-217ENST00000574022 RPS25P62851 125 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms