RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 RAB9AP51151 201 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 FAM209BQ5JX69 171 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 C5orf56Q8N8D9 126 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 C10orf105Q8TEF2 133 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 ATP6V0BQ99437 205 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 CCL19Q99731 98 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 ALKBH7Q9BT30 221 aaPredicted RBP12.69□□□□□ -0.38
POLR2A-201ENST00000572844 CACNA1BQ00975 2339 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 IGHV1-69DA0A0B4J2H0 117 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 IGHV1-69P01742 117 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 CSN1S1P47710 185 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 C14orf144Q96I85 54 aa12.69□□□□□ -0.38
POLR2A-201ENST00000572844 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
POLR2A-201ENST00000572844 CRIP2P52943 208 aaPredicted RBP12.68□□□□□ -0.38
POLR2A-201ENST00000572844 RHOGP84095 191 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 ECSCRQ19T08 205 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 C1orf194Q5T5A4 169 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 RCHY1Q96PM5 261 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 TACC2O95359 2948 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 HAX1O00165 279 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 CAMPP49913 170 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 PGLYRP4Q96LB8 373 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 MOB4Q9Y3A3 225 aa12.68□□□□□ -0.38
POLR2A-201ENST00000572844 IGHV4-61A0A0C4DH41 118 aa12.67□□□□□ -0.38
POLR2A-201ENST00000572844 FAM162BQ5T6X4 162 aa12.67□□□□□ -0.38
POLR2A-201ENST00000572844 TEX43Q6ZNM6 134 aa12.67□□□□□ -0.38
POLR2A-201ENST00000572844 ZFAND3Q9H8U3 227 aa12.67□□□□□ -0.38
POLR2A-201ENST00000572844 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 KIR2DL5BA0A0G2JN68 375 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 KIR2DL5BA0A0G2JPC4 375 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 M0R3E3 92 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
POLR2A-201ENST00000572844 AMTP48728 403 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 TOMM20LQ6UXN7 152 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 KIR2DL5AQ8N109 375 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 USP24Q9UPU5 2620 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 MED13LQ71F56 2210 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 A0A087X0K7 114 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
POLR2A-201ENST00000572844 ZNF705DP0CH99 300 aaPredicted RBP12.66□□□□□ -0.38
POLR2A-201ENST00000572844 ZNF705BP0CI00 300 aaPredicted RBP12.66□□□□□ -0.38
POLR2A-201ENST00000572844 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 Q6AWC8 147 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 EEF1AKMT3Q96AZ1 226 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 ABCA2Q9BZC7 2435 aa12.66□□□□□ -0.38
POLR2A-201ENST00000572844 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 A0A1B0GW15 77 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 CLEC3BP05452 202 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 GPR183P32249 361 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 CLEC2AQ6UVW9 174 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 SPOCK3Q9BQ16 436 aa12.65□□□□□ -0.38
POLR2A-201ENST00000572844 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.39
POLR2A-201ENST00000572844 CRIP1P50238 77 aa12.65□□□□□ -0.39
POLR2A-201ENST00000572844 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.39
POLR2A-201ENST00000572844 PIFOQ8TCI5 191 aa12.65□□□□□ -0.39
POLR2A-201ENST00000572844 CCDC140Q96MF4 163 aa12.65□□□□□ -0.39
POLR2A-201ENST00000572844 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.39
POLR2A-201ENST00000572844 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
POLR2A-201ENST00000572844 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
POLR2A-201ENST00000572844 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
POLR2A-201ENST00000572844 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 G3V318 75 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 RIGQ13278 110 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 Q71RC1 249 aaPredicted RBP12.63□□□□□ -0.39
POLR2A-201ENST00000572844 NIT1Q86X76 327 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 NDFIP1Q9BT67 221 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 A0A1B0GUT8 65 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 CHEK1O14757 476 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 BUB3O43684 328 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 BRI3O95415 125 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 PMCHP20382 165 aa12.63□□□□□ -0.39
POLR2A-201ENST00000572844 CFAP46Q8IYW2 2715 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 FAM223BA6NKX1 122 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 CD33P20138 364 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 ATP5J2P56134 94 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 CYB5R2Q6BCY4 276 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 FAM223AQ8IWN6 122 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 Q8N976 141 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 C20orf144Q9BQM9 153 aa12.62□□□□□ -0.39
POLR2A-201ENST00000572844 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 TRAV40A0A0B4J280 105 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 IGHG4P01861 327 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
POLR2A-201ENST00000572844 ATP5G2Q06055 141 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
POLR2A-201ENST00000572844 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 LOC102724200A0A096LPH7 203 aaPredicted RBP12.61□□□□□ -0.39
POLR2A-201ENST00000572844 CLPSL1A2RUU4 121 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 PRR25Q96S07 402 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms