RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 FAM210BQ96KR6 192 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 SDHCQ99643 169 aaPredicted RBP6.65□□□□□ -1.34
CIITA-208ENST00000572665 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 SHPKQ9UHJ6 478 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.34
CIITA-208ENST00000572665 DUXBA0A1W2PPF3 345 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 SNRPGP15A8MWD9 76 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 H3BMM0 161 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 MED6O75586 246 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 IFNA21P01568 189 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 PSMB3P49720 205 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 MEOX2P50222 304 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
CIITA-208ENST00000572665 FAAP20Q6NZ36 180 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 EBLN2Q6P2I7 272 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 FOXI2Q6ZQN5 318 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 POM121L12Q8N7R1 296 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 OR51S1Q8NGJ8 323 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 OR1S1Q8NH92 325 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 LHFPL5Q8TAF8 219 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 PBDC1Q9BVG4 233 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 MCUBQ9NWR8 336 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 XCL2Q9UBD3 114 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 GOLT1BQ9Y3E0 138 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 RFNGQ9Y644 331 aa6.64□□□□□ -1.35
CIITA-208ENST00000572665 AP3S2P59780 193 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 C12orf74Q32Q52 190 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 ZNF705AQ6ZN79 300 aaPredicted RBP6.63□□□□□ -1.35
CIITA-208ENST00000572665 UBE2DNLQ8IWF7 75 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 LINC00052Q96N35 136 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 RBKSQ9H477 322 aa6.63□□□□□ -1.35
CIITA-208ENST00000572665 SAV1Q9H4B6 383 aaPredicted RBP6.63□□□□□ -1.35
CIITA-208ENST00000572665 KMT2AQ03164 3969 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 ISLRO14498 428 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 HBE1P02100 147 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 GALR1P47211 349 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 LYZP61626 148 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 SOHLH1Q5JUK2 328 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 Q75L30 129 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 OR8I2Q8N0Y5 310 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 TOMM5Q8N4H5 51 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 OR4B1Q8NGF8 309 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 GPR82Q96P67 336 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
CIITA-208ENST00000572665 TRGV9Q99603 122 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 C7orf50Q9BRJ6 194 aaKnown RBP6.62□□□□□ -1.35
CIITA-208ENST00000572665 RPRMQ9NS64 109 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
CIITA-208ENST00000572665 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
CIITA-208ENST00000572665 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 ZNF705FA8MVS1 300 aaPredicted RBP6.61□□□□□ -1.35
CIITA-208ENST00000572665 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
CIITA-208ENST00000572665 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
CIITA-208ENST00000572665 SLC25A6P12236 298 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 IL7P13232 177 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 PSG9Q00887 426 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 GAMTQ14353 236 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 OXA1LQ15070 435 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 TMEM128Q5BJH2 165 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 LYZL2Q7Z4W2 148 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 S100A7AQ86SG5 101 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 S100ZQ8WXG8 99 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 NIPSNAP3BQ9BS92 247 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
CIITA-208ENST00000572665 IGKV3-20P01619 116 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 VPREB1P12018 145 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 EMP1P54849 157 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 PAX9P55771 341 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 B2MP61769 119 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 RRN3P1Q2M238 152 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 RNF212Q495C1 297 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 ZNF767PQ75MW2 155 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 OR4D5Q8NGN0 318 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 OR1B1Q8NGR6 318 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 SLC25A21Q9BQT8 299 aaPredicted RBP6.6□□□□□ -1.35
CIITA-208ENST00000572665 TMEM208Q9BTX3 173 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 CCDC32Q9BV29 185 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 MAGT1Q9H0U3 335 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 PAIP2BQ9ULR5 123 aaKnown RBP6.6□□□□□ -1.35
CIITA-208ENST00000572665 RNF24Q9Y225 148 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 TMED3Q9Y3Q3 217 aa6.6□□□□□ -1.35
CIITA-208ENST00000572665 DUSP14O95147 198 aaKnown RBP6.59□□□□□ -1.35
CIITA-208ENST00000572665 BTCP35070 178 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 ZNF90Q03938 601 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 TRIQKQ629K1 86 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 TMED4Q7Z7H5 227 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 LRTM2Q8N967 370 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 BPIFCQ8NFQ6 507 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 TMEM147Q9BVK8 224 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 DOK5Q9P104 306 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
CIITA-208ENST00000572665 IGKV1D-37A0A075B6S9 117 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 A0A0J9YX75 114 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 NAP1L6A6NFF2 107 aa6.58□□□□□ -1.36
CIITA-208ENST00000572665 PLA2G10O15496 165 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms