RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 RPUSD4Q96CM3 377 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-202ENST00000570380 RBKSQ9H477 322 aa6.94□□□□□ -1.3
CTDNEP1-202ENST00000570380 GSN-AS1Q9NRJ2 163 aa6.94□□□□□ -1.3
CTDNEP1-202ENST00000570380 FUT9Q9Y231 359 aa6.94□□□□□ -1.3
CTDNEP1-202ENST00000570380 TRGV1A0A0A0MS02 117 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 TEX13DA0A0J9YY54 714 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 PRAF2O60831 178 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 IGHV3-53P01767 116 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 CRYBA4P53673 196 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 TMEM268Q5VZI3 342 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 SNX29P2Q8IUI4 249 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 C11orf72Q8NBR9 251 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 ZFAND1Q8TCF1 268 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 DTD1Q8TEA8 209 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 TMEM147Q9BVK8 224 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 HSPB7Q9UBY9 170 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
CTDNEP1-202ENST00000570380 H3BRN7 92 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 J3KRW8 73 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 SULT1A3P0DMM9 295 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 SULT1A4P0DMN0 295 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 ATP5IP56385 69 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 RNASE10Q5GAN6 216 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 CCDC190Q86UF4 302 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 LRTM2Q8N967 370 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 MARCH1Q8TCQ1 289 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 ST6GAL2Q96JF0 529 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 C8orf49Q96NF6 230 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 PYGO2Q9BRQ0 406 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 CACFD1Q9UGQ2 172 aa6.92□□□□□ -1.3
CTDNEP1-202ENST00000570380 A0A087X0K7 114 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 SPINK4O60575 86 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 CD3DP04234 171 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 ASIPP42127 132 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 FHL2Q14192 279 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 WFDC2Q14508 124 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 SPCS2Q15005 226 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 CLVS1Q8IUQ0 354 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 CROCCP3Q8IVE0 287 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 BPIFCQ8NFQ6 507 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 OR4D10Q8NGI6 311 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 TERB2Q8NHR7 220 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 RTBDNQ9BSG5 229 aaPredicted RBP6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 SHANK2-AS3Q9BTD1 123 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 NAA60Q9H7X0 242 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 HHLA3Q9XRX5 114 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
CTDNEP1-202ENST00000570380 LINC00854A0A1B0GVQ3 168 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 PRAC2D3DTV9 90 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 K7EQD1 137 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 S100A7P31151 101 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 LRRC20Q8TCA0 184 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 ZNF431Q8TF32 576 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
CTDNEP1-202ENST00000570380 TRAV5A0A0B4J249 113 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 SMIM31A0A1B0GVY4 71 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 E5RGE8 158 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 RS1O15537 224 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 HPGDSO60760 199 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 SRIP30626 198 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 SLAQ13239 276 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 SCGB2B2Q4G0G5 96 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 STEAP1BQ6NZ63 245 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 OR1S1Q8NH92 325 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 CHAC1Q9BUX1 264 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 MRPL32Q9BYC8 188 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 Q9HAA7 133 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
CTDNEP1-202ENST00000570380 CRYM-AS1A6NIL9 109 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 PMS2P5A8MQ11 134 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 PRSS46E5RG02 174 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 MRPS12O15235 138 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 APOA1P02647 267 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 SNRPCP09234 159 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 CCR6P51684 374 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 TCL1AP56279 114 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 RAB11AP62491 216 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 DAZAP1Q96EP5 407 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 ZNF331Q9NQX6 463 aaPredicted RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 PAIP2BQ9ULR5 123 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 C14orf166Q9Y224 244 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 HIGD1AQ9Y241 93 aa6.88□□□□□ -1.31
CTDNEP1-202ENST00000570380 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms