RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CFDP00746 253 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-220ENST00000569827 LINC00315P59091 139 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 RAP2BP61225 183 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 PPP1R1AQ13522 171 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 TMEM256Q8N2U0 113 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
CAPN3-220ENST00000569827 TMPRSS5Q9H3S3 457 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 RABL2BQ9UNT1 228 aa8.33□□□□□ -1.08
CAPN3-220ENST00000569827 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 SLC17A3O00476 420 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 HYPMO75409 117 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 MED6O75586 246 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 RPL7P18124 248 aaKnown RBP8.32□□□□□ -1.08
CAPN3-220ENST00000569827 M6PRP20645 277 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 CDKN1BP46527 198 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 POLR2GP62487 172 aaKnown RBP eCLIP8.32□□□□□ -1.08
CAPN3-220ENST00000569827 SLC38A11Q08AI6 406 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 TMEM128Q5BJH2 165 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 GFI1BQ5VTD9 330 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 PATE2Q6UY27 113 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 DYNC2LI1Q8TCX1 351 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-220ENST00000569827 ARL6Q9H0F7 186 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 STRAPQ9Y3F4 350 aaKnown RBP8.32□□□□□ -1.08
CAPN3-220ENST00000569827 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
CAPN3-220ENST00000569827 A0A087X0K7 114 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 DUXBA0A1W2PPF3 345 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 MRPS12O15235 138 aaKnown RBP8.31□□□□□ -1.08
CAPN3-220ENST00000569827 SSSCA1O60232 199 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 ADAP1O75689 374 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 TNFSF8P32971 234 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 Q6ZTI0 123 aa8.31□□□□□ -1.08
CAPN3-220ENST00000569827 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 H7BYZ3 331 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 SFT2D2O95562 160 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 RLN2P04090 185 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 SLC25A6P12236 298 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 ANXA7P20073 488 aaKnown RBP8.3□□□□□ -1.08
CAPN3-220ENST00000569827 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
CAPN3-220ENST00000569827 MORN5Q5VZ52 161 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 ZNF493Q6ZR52 646 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 LINC00612Q8N6U2 182 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 LRTM2Q8N967 370 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 OR10J6PQ8NGY7 276 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 TRIM63Q969Q1 353 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 UPK3BQ9BT76 320 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 PSENENQ9NZ42 101 aa8.3□□□□□ -1.08
CAPN3-220ENST00000569827 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
CAPN3-220ENST00000569827 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
CAPN3-220ENST00000569827 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 FABP12A6NFH5 140 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 METTL15P1P0C7V9 234 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 DNAH10OSP0CZ25 163 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 INAFM2P0DMQ5 153 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 HAMPP81172 84 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-220ENST00000569827 MCFD2Q8NI22 146 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 VSIG2Q96IQ7 327 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 SOSTQ9BQB4 213 aa8.29□□□□□ -1.08
CAPN3-220ENST00000569827 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-220ENST00000569827 RSL24D1Q9UHA3 163 aaKnown RBP8.29□□□□□ -1.08
CAPN3-220ENST00000569827 A0A096LPF7 62 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 SCGB1D2O95969 90 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
CAPN3-220ENST00000569827 XGP55808 180 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 PLP1P60201 277 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 PYDC2Q56P42 97 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 CCDC28AQ8IWP9 274 aa8.28□□□□□ -1.08
CAPN3-220ENST00000569827 ZBTB8BQ8NAP8 495 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-220ENST00000569827 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
CAPN3-220ENST00000569827 SLIRPQ9GZT3 109 aaKnown RBP8.28□□□□□ -1.08
CAPN3-220ENST00000569827 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.09
CAPN3-220ENST00000569827 CT45A10P0DMU9 189 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 S100A7P31151 101 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 FAUP35544 74 aaKnown RBP8.27□□□□□ -1.09
CAPN3-220ENST00000569827 ARL16Q0P5N6 197 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 Q5VSD8 79 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 TOMM5Q8N4H5 51 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
CAPN3-220ENST00000569827 RABL2AQ9UBK7 228 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-220ENST00000569827 TRAV5A0A0B4J249 113 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 H3BQ15 152 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 NXPH4O95158 308 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 IGHV3-53P01767 116 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-220ENST00000569827 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 ID3Q02535 119 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 OPCMLQ14982 345 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
CAPN3-220ENST00000569827 SLC50A1Q9BRV3 221 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms