RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 H3BP45 60 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 ORM2P19652 201 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 HOXA5P20719 270 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 POLR2GP62487 172 aaKnown RBP eCLIP10.27□□□□□ -0.77
USB1-214ENST00000568848 ID3Q02535 119 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 HIST1H1AQ02539 215 aaPredicted RBP10.27□□□□□ -0.77
USB1-214ENST00000568848 ESRGQ1W209 222 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
USB1-214ENST00000568848 CIB3Q96Q77 187 aaPredicted RBP10.27□□□□□ -0.77
USB1-214ENST00000568848 BOLA2-SMG1P6H3BVE0 249 aa10.26□□□□□ -0.77
USB1-214ENST00000568848 LYRM1O43325 122 aa10.26□□□□□ -0.77
USB1-214ENST00000568848 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
USB1-214ENST00000568848 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
USB1-214ENST00000568848 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
USB1-214ENST00000568848 OR4D5Q8NGN0 318 aa10.26□□□□□ -0.77
USB1-214ENST00000568848 TRGV9Q99603 122 aa10.26□□□□□ -0.77
USB1-214ENST00000568848 CBY3A6NI87 242 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 GALR1P47211 349 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 XGP55808 180 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 LINC00315P59091 139 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 RHOBP62745 196 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 THAP8Q8NA92 274 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 C20orf85Q9H1P6 137 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 PSENENQ9NZ42 101 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
USB1-214ENST00000568848 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
USB1-214ENST00000568848 TRAV6A0A075B6T7 132 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 SSSCA1O60232 199 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 CCNKO75909 580 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 SCGB1D2O95969 90 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 TCRBP04435 133 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 Q5VSD8 79 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 GNPNAT1Q96EK6 184 aaPredicted RBP10.24□□□□□ -0.77
USB1-214ENST00000568848 Q9H3A6 140 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 GSKIPQ9P0R6 139 aa10.24□□□□□ -0.77
USB1-214ENST00000568848 GAGE12BA1L429 117 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 J3KRW8 73 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 CCSO14618 274 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 GAGE7O76087 117 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
USB1-214ENST00000568848 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 TSPOP30536 169 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 IAH1Q2TAA2 248 aaPredicted RBP10.23□□□□□ -0.77
USB1-214ENST00000568848 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
USB1-214ENST00000568848 MITD1Q8WV92 249 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 SEC22CQ9BRL7 303 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 PFDN2Q9UHV9 154 aa10.23□□□□□ -0.77
USB1-214ENST00000568848 SMCO3A2RU48 225 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 PMS2P5A8MQ11 134 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 H3BTX0 84 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
USB1-214ENST00000568848 FABP1P07148 127 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 MEOX2P50222 304 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 AKR1C1Q04828 323 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 CNPY1Q3B7I2 92 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 ACOT7LQ6ZUV0 252 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 ZBTB8BQ8NAP8 495 aaPredicted RBP10.22□□□□□ -0.77
USB1-214ENST00000568848 OR8A1Q8NGG7 326 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
USB1-214ENST00000568848 SMIM8Q96KF7 97 aa10.22□□□□□ -0.77
USB1-214ENST00000568848 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
USB1-214ENST00000568848 PRAC2D3DTV9 90 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 H3BRN7 92 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 TAS2R60P59551 318 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 RRAS2P62070 204 aaPredicted RBP10.21□□□□□ -0.77
USB1-214ENST00000568848 TMEM144Q7Z5S9 345 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 CCDC32Q9BV29 185 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 TMPRSS5Q9H3S3 457 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 NUDT15Q9NV35 164 aa10.21□□□□□ -0.77
USB1-214ENST00000568848 TIMM8BQ9Y5J9 83 aaPredicted RBP10.21□□□□□ -0.77
USB1-214ENST00000568848 A6NHS1 94 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
USB1-214ENST00000568848 METTL15P1P0C7V9 234 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 CXCL3P19876 107 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 RXFP4Q8TDU9 374 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 TMEM147Q9BVK8 224 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 PPP1R14DQ9NXH3 145 aa10.2□□□□□ -0.78
USB1-214ENST00000568848 RCL1Q9Y2P8 373 aaKnown RBP10.2□□□□□ -0.78
USB1-214ENST00000568848 FAM25EA8MYX2 175 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 H2AFB2P0C5Z0 115 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 BTF3P20290 206 aaKnown RBP10.19□□□□□ -0.78
USB1-214ENST00000568848 M6PRP20645 277 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 TTC32Q5I0X7 151 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 TMEM14EPQ6UXP3 125 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 BPIFCQ8NFQ6 507 aa10.19□□□□□ -0.78
USB1-214ENST00000568848 ZNF431Q8TF32 576 aaPredicted RBP10.19□□□□□ -0.78
USB1-214ENST00000568848 MRPS16Q9Y3D3 137 aaKnown RBP10.19□□□□□ -0.78
USB1-214ENST00000568848 FAM240BA0A1B0GVZ2 78 aa10.18□□□□□ -0.78
USB1-214ENST00000568848 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
USB1-214ENST00000568848 ARL16Q0P5N6 197 aa10.18□□□□□ -0.78
USB1-214ENST00000568848 GFI1BQ5VTD9 330 aa10.18□□□□□ -0.78
USB1-214ENST00000568848 CYP2G1PQ6ZSU1 146 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms