RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PLXNB1O43157 2135 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 PRB1P04280 392 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 DLX1P56177 255 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 Q56UQ5 140 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 PRNTQ86SH4 94 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 CIARTQ8N365 385 aaPredicted RBP13.21□□□□□ -0.29
CMTM3-213ENST00000566756 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 ZNF491Q8N8L2 437 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 CFHR4Q92496 578 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
CMTM3-213ENST00000566756 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 M0R1W7 72 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
CMTM3-213ENST00000566756 EFNA4P52798 201 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 BATFQ16520 125 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 RNF125Q96EQ8 232 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 ZFYVE26Q68DK2 2539 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 TRAV8-1A0A0A6YYK1 113 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 HLA-DRB1P01911 266 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 RIGQ13278 110 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 PSG3Q16557 428 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 ST20Q9HBF5 79 aa13.2□□□□□ -0.3
CMTM3-213ENST00000566756 NPIPB5A8MRT5 1133 aa13.19□□□□□ -0.3
CMTM3-213ENST00000566756 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
CMTM3-213ENST00000566756 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-213ENST00000566756 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 SYS1-DBNDD2H3BUS1 97 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 SCGB2A1O75556 95 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 IGLL1P15814 213 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 S100A7P31151 101 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 IGFBPL1Q8WX77 278 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 PSG8Q9UQ74 426 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 ODF3BA8MYP8 253 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 LDLRAD2Q5SZI1 272 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 ZC2HC1AQ96GY0 325 aa13.18□□□□□ -0.3
CMTM3-213ENST00000566756 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-213ENST00000566756 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
CMTM3-213ENST00000566756 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
CMTM3-213ENST00000566756 STPG4Q8N801 248 aa13.17□□□□□ -0.3
CMTM3-213ENST00000566756 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
CMTM3-213ENST00000566756 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 PRB3Q04118 309 aaPredicted RBP13.16□□□□□ -0.3
CMTM3-213ENST00000566756 C5orf64Q2M2E5 130 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 HSPB8Q9UJY1 196 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 SPTAN1Q13813 2472 aaKnown RBP13.16□□□□□ -0.3
CMTM3-213ENST00000566756 FLNCQ14315 2725 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 IL4P05112 153 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 PRTN3P24158 256 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 MFAP4P55083 255 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 CCDC144NLQ6NUI1 221 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 KIR3DL3Q8N743 410 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
CMTM3-213ENST00000566756 NDUFS7O75251 213 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 NPSP0C0P6 89 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 ZNF493Q6ZR52 646 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 MYO18BQ8IUG5 2567 aa13.15□□□□□ -0.3
CMTM3-213ENST00000566756 GNG7O60262 68 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 PSG9Q00887 426 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 TTC9CQ8N5M4 171 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 THYN1Q9P016 225 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 NDUFB8O95169 186 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 TFPI2P48307 235 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
CMTM3-213ENST00000566756 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
CMTM3-213ENST00000566756 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
CMTM3-213ENST00000566756 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
CMTM3-213ENST00000566756 CSN1S1P47710 185 aa13.13□□□□□ -0.31
CMTM3-213ENST00000566756 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 M0QZ24 198 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 CRIP1P50238 77 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 ARF6P62330 175 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 MS4A6AQ9H2W1 248 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 CD24P25063 80 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 EBI3Q14213 229 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 HILPDAQ9Y5L2 63 aa13.12□□□□□ -0.31
CMTM3-213ENST00000566756 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms