RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 C18orf32Q8TCD1 76 aa14.61□□□□□ -0.07
MSLN-207ENST00000566549 KRTDAPP60985 99 aa14.61□□□□□ -0.07
MSLN-207ENST00000566549 RASL11AQ6T310 242 aa14.61□□□□□ -0.07
MSLN-207ENST00000566549 ZNF48Q96MX3 618 aaPredicted RBP14.61□□□□□ -0.07
MSLN-207ENST00000566549 RNF24Q9Y225 148 aa14.61□□□□□ -0.07
MSLN-207ENST00000566549 SPG11Q96JI7 2443 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 A0A1B0GXF2 115 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 ZNF785A8K8V0 405 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 NTF3P20783 257 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 HBBP68871 147 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 TDRG1Q3Y452 100 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 IGFL4Q6B9Z1 124 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 BRD3OSQ6XYD6 125 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 VN1R17PQ8TDU5 208 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 PSG8Q9UQ74 426 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 DIRC3C9JPN6 131 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 TMEM75Q8N9X5 138 aa14.6□□□□□ -0.07
MSLN-207ENST00000566549 IGHV4-61A0A0C4DH41 118 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 K7EQM0 130 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 RHOGP84095 191 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 PSG3Q16557 428 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 CCL19Q99731 98 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 AAMDCQ9H7C9 122 aa14.59□□□□□ -0.07
MSLN-207ENST00000566549 PAX1P15863 534 aa14.58□□□□□ -0.07
MSLN-207ENST00000566549 CT83Q5H943 113 aa14.58□□□□□ -0.07
MSLN-207ENST00000566549 REC114Q7Z4M0 266 aa14.58□□□□□ -0.07
MSLN-207ENST00000566549 ATP5L2Q7Z4Y8 100 aa14.58□□□□□ -0.07
MSLN-207ENST00000566549 NRN1Q9NPD7 142 aa14.58□□□□□ -0.07
MSLN-207ENST00000566549 CSMD2Q7Z408 3487 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 ZNF324O75467 553 aaPredicted RBP14.58□□□□□ -0.08
MSLN-207ENST00000566549 CLEC3BP05452 202 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 FOXA3P55318 350 aaPredicted RBP14.58□□□□□ -0.08
MSLN-207ENST00000566549 LYPD1Q8N2G4 141 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 FAM110DQ8TAY7 271 aaPredicted RBP14.58□□□□□ -0.08
MSLN-207ENST00000566549 C8orf49Q96NF6 230 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 RABAC1Q9UI14 185 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 LINC00527Q9UJ94 153 aa14.58□□□□□ -0.08
MSLN-207ENST00000566549 UTP20O75691 2785 aaKnown RBP14.58□□□□□ -0.08
MSLN-207ENST00000566549 RBPMS2Q6ZRY4 209 aaKnown RBP14.57□□□□□ -0.08
MSLN-207ENST00000566549 S100A7AQ86SG5 101 aa14.57□□□□□ -0.08
MSLN-207ENST00000566549 ALKBH7Q9BT30 221 aaPredicted RBP14.57□□□□□ -0.08
MSLN-207ENST00000566549 IGKV2-40A0A087WW87 121 aaPredicted RBP14.57□□□□□ -0.08
MSLN-207ENST00000566549 NPIPB6E9PJ23 425 aa14.57□□□□□ -0.08
MSLN-207ENST00000566549 ACACBO00763 2458 aa14.57□□□□□ -0.08
MSLN-207ENST00000566549 IGKV2D-40P01614 121 aaPredicted RBP14.57□□□□□ -0.08
MSLN-207ENST00000566549 TPPP3Q9BW30 176 aa14.57□□□□□ -0.08
MSLN-207ENST00000566549 IGHV3-66A0A0C4DH42 116 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 USP9XQ93008 2570 aaPredicted RBP14.56□□□□□ -0.08
MSLN-207ENST00000566549 ABCA2Q9BZC7 2435 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 TRAV40A0A0B4J280 105 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 SCGB2A1O75556 95 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 HLA-DMBP28068 263 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 ZNF502Q8TBZ5 544 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 ZFP30Q9Y2G7 519 aa14.56□□□□□ -0.08
MSLN-207ENST00000566549 M0QZ24 198 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 RNF224P0DH78 156 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 RPL7P18124 248 aaKnown RBP14.55□□□□□ -0.08
MSLN-207ENST00000566549 CRIP1P50238 77 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 SSTP61278 116 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 RNASEKQ6P5S7 137 aaKnown RBP14.55□□□□□ -0.08
MSLN-207ENST00000566549 CLEC19AQ6UXS0 136 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 PIMREGQ9BSJ6 248 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 SOX21Q9Y651 276 aaPredicted RBP14.55□□□□□ -0.08
MSLN-207ENST00000566549 SMAD5-AS1Q9Y6J3 95 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 CELSR2Q9HCU4 2923 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 CSN1S1P47710 185 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 PDE6HQ13956 83 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 LINC00469Q8N7U9 141 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 GFRA4Q9GZZ7 299 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 PAM16Q9Y3D7 125 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 CRYBG3Q68DQ2 2970 aa14.55□□□□□ -0.08
MSLN-207ENST00000566549 C1orf194Q5T5A4 169 aa14.54□□□□□ -0.08
MSLN-207ENST00000566549 C5orf56Q8N8D9 126 aa14.54□□□□□ -0.08
MSLN-207ENST00000566549 TMSB15BA0A087X1C1 80 aa14.54□□□□□ -0.08
MSLN-207ENST00000566549 NIT1Q86X76 327 aa14.54□□□□□ -0.08
MSLN-207ENST00000566549 IGHV3-49A0A0A0MS15 119 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 TRBV6-1A0A0K0K1D8 114 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 CHEK1O14757 476 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 OR4B1Q8NGF8 309 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 Q8TAT8 98 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 CCDC140Q96MF4 163 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 NDUFAF3Q9BU61 184 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 HSBP1O75506 76 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 ATP5J2P56134 94 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 PAX8Q06710 450 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 TXN2Q99757 166 aa14.53□□□□□ -0.08
MSLN-207ENST00000566549 MYO18BQ8IUG5 2567 aa14.52□□□□□ -0.08
MSLN-207ENST00000566549 ZNF207O43670 478 aaKnown RBP14.52□□□□□ -0.08
MSLN-207ENST00000566549 ARMS2P0C7Q2 107 aa14.52□□□□□ -0.08
MSLN-207ENST00000566549 PSG9Q00887 426 aa14.52□□□□□ -0.08
MSLN-207ENST00000566549 TEX43Q6ZNM6 134 aa14.52□□□□□ -0.08
MSLN-207ENST00000566549 DOPEY1Q5JWR5 2465 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 ZFYVE26Q68DK2 2539 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 IGHV4-30-2A0A087WSY4 118 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 KIR2DL5BA0A0G2JN68 375 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 KIR2DL5BA0A0G2JPC4 375 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 CT45A10P0DMU9 189 aa14.52□□□□□ -0.09
MSLN-207ENST00000566549 IGHV4-38-2P0DP08 117 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms