RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ST20Q9HBF5 79 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 NUDT3O95989 172 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 RIGQ13278 110 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 BCL6BQ8N143 479 aaPredicted RBP11.24□□□□□ -0.61
CDH1-209ENST00000566510 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 GNG7O60262 68 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 PSG3Q16557 428 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
CDH1-209ENST00000566510 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
CDH1-209ENST00000566510 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 FAM90A27PA6NNH2 459 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 H3BRN7 92 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 CRIP1P50238 77 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 PAX2Q02962 417 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 UBE2V1Q13404 147 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 VAMP3Q15836 100 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
CDH1-209ENST00000566510 NBR2O15453 112 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
CDH1-209ENST00000566510 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 SFTPCP11686 197 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 HOXB4P17483 251 aaPredicted RBP11.22□□□□□ -0.61
CDH1-209ENST00000566510 KLRD1Q13241 179 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 PET117Q6UWS5 81 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 SNAI2O43623 268 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
CDH1-209ENST00000566510 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
CDH1-209ENST00000566510 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
CDH1-209ENST00000566510 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
CDH1-209ENST00000566510 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
CDH1-209ENST00000566510 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.61
CDH1-209ENST00000566510 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
CDH1-209ENST00000566510 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
CDH1-209ENST00000566510 FAM106CPP0CH98 169 aa11.21□□□□□ -0.62
CDH1-209ENST00000566510 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.62
CDH1-209ENST00000566510 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.62
CDH1-209ENST00000566510 FBLN7Q53RD9 439 aa11.21□□□□□ -0.62
CDH1-209ENST00000566510 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.62
CDH1-209ENST00000566510 RNF5Q99942 180 aa11.21□□□□□ -0.62
CDH1-209ENST00000566510 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 A0A087X0K7 114 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 CBY3A6NI87 242 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 CSN1S1P47710 185 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 TCTAP57738 103 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 FXYD7P58549 80 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 LYZL1Q6UWQ5 148 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 SPTBN1Q01082 2364 aaKnown RBP11.2□□□□□ -0.62
CDH1-209ENST00000566510 TMEM213A2RRL7 107 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 D6R8Y8 96 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 OVOL3O00110 214 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
CDH1-209ENST00000566510 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
CDH1-209ENST00000566510 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
CDH1-209ENST00000566510 OR10AG1Q8NH19 301 aa11.19□□□□□ -0.62
CDH1-209ENST00000566510 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
CDH1-209ENST00000566510 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
CDH1-209ENST00000566510 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
CDH1-209ENST00000566510 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
CDH1-209ENST00000566510 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
CDH1-209ENST00000566510 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 NCR2O95944 276 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 MFAP4P55083 255 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 BVES-AS1Q5T3Y7 98 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
CDH1-209ENST00000566510 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 CEACAM3P40198 252 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
CDH1-209ENST00000566510 TCF15Q12870 199 aa11.18□□□□□ -0.62
CDH1-209ENST00000566510 WI2-2373I1.2A0A1W2PRP0 233 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
CDH1-209ENST00000566510 Q6AWC8 147 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 C12orf54Q6X4T0 127 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 S100A7AQ86SG5 101 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 VKORC1Q9BQB6 163 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
CDH1-209ENST00000566510 A0A1B0GW15 77 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms