RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 SMCO1Q147U7 214 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 GPR107Q5VW38 600 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 LYPD5Q6UWN5 251 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 THAP8Q8NA92 274 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 OR4D10Q8NGI6 311 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 OR1S1Q8NH92 325 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
VPS4A-203ENST00000564399 LINC00467Q9BRT7 94 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 RTBDNQ9BSG5 229 aaPredicted RBP4.95□□□□□ -1.62
VPS4A-203ENST00000564399 PARD6GQ9BYG4 376 aaPredicted RBP4.95□□□□□ -1.62
VPS4A-203ENST00000564399 FAM30AQ9NZY2 134 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 HSPB7Q9UBY9 170 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 RAB26Q9ULW5 256 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 FUT9Q9Y231 359 aa4.95□□□□□ -1.62
VPS4A-203ENST00000564399 TRGV1A0A0A0MS02 117 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 TRAV12-3A0A0B4J271 114 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 FAM25AB3EWG3 89 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 FAM25CB3EWG5 89 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 FAM25GB3EWG6 89 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 HPGDSO60760 199 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 ZNF324O75467 553 aaPredicted RBP4.94□□□□□ -1.62
VPS4A-203ENST00000564399 IGHV3-53P01767 116 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 IAPPP10997 89 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 AKR1C4P17516 323 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 RAP2BP61225 183 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
VPS4A-203ENST00000564399 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
VPS4A-203ENST00000564399 GFI1BQ5VTD9 330 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 STEAP1BQ6NZ63 245 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 TMEM182Q6ZP80 229 aaPredicted RBP4.94□□□□□ -1.62
VPS4A-203ENST00000564399 OR52I2Q8NH67 350 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 HIGD1AQ9Y241 93 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 KCNIP3Q9Y2W7 256 aa4.94□□□□□ -1.62
VPS4A-203ENST00000564399 CRYM-AS1A6NIL9 109 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 H3BRN7 92 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 K7EP13 123 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 OXTP01178 125 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 IL5P05113 134 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 OR5G3P0C626 314 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 TAS2R19P59542 299 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 AKR1C1Q04828 323 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 NEGR1Q7Z3B1 354 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 LYZL2Q7Z4W2 148 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 WFDC10BQ8IUB3 73 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 TMEM229BQ8NBD8 167 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 IL22RA2Q969J5 263 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 PYGO2Q9BRQ0 406 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 SHANK2-AS3Q9BTD1 123 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 GSN-AS1Q9NRJ2 163 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 MTFP1Q9UDX5 166 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
VPS4A-203ENST00000564399 A0A087X0K7 114 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 A0A0B4J2A0 478 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 SMCO3A2RU48 225 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 DISC1C4P0D8 188 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 PRAF2O60831 178 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 HYPMO75409 117 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 C1QBP02746 253 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 CRYGDP07320 174 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
VPS4A-203ENST00000564399 ANXA7P20073 488 aaKnown RBP4.92□□□□□ -1.62
VPS4A-203ENST00000564399 SLAQ13239 276 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 SURF2Q15527 256 aaPredicted RBP4.92□□□□□ -1.62
VPS4A-203ENST00000564399 FAAP20Q6NZ36 180 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 S100A7AQ86SG5 101 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 C10orf126Q8N4M7 172 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 SHPKQ9UHJ6 478 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 GPR132Q9UNW8 380 aa4.92□□□□□ -1.62
VPS4A-203ENST00000564399 PMS2P5A8MQ11 134 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 PRAC2D3DTV9 90 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 E5RGE8 158 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 SRIP30626 198 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 LEPP41159 167 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 CRYBA4P53673 196 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 RPP30P78346 268 aaKnown RBP4.91□□□□□ -1.62
VPS4A-203ENST00000564399 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 MZT2AQ6P582 158 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 LCN15Q6UWW0 184 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 CYP2G1PQ6ZSU1 146 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 Q8N814 137 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 ZBTB8BQ8NAP8 495 aaPredicted RBP4.91□□□□□ -1.62
VPS4A-203ENST00000564399 ZNF680Q8NEM1 530 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 SLC50A1Q9BRV3 221 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 Q9H521 79 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 ZNF331Q9NQX6 463 aaPredicted RBP4.91□□□□□ -1.62
VPS4A-203ENST00000564399 EXTL2Q9UBQ6 330 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 HHLA3Q9XRX5 114 aa4.91□□□□□ -1.62
VPS4A-203ENST00000564399 LRP1Q07954 4544 aaKnown RBP4.91□□□□□ -1.62
VPS4A-203ENST00000564399 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 WRBO00258 174 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 MED6O75586 246 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 LINC00869P0C866 280 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 CXCL2P19875 107 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 SPANXN5Q5MJ07 72 aa4.9□□□□□ -1.63
VPS4A-203ENST00000564399 ACOT7LQ6ZUV0 252 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms