RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IGKV1OR2-108A0A075B7D4 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 GAGE12BA1L429 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 SCGB2A1O75556 95 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 GAGE7O76087 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 INSP01308 110 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 CD3DP04234 171 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 SUPT4H1P63272 117 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 MT1HP80294 61 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 ZNF493Q6ZR52 646 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 CROCCP3Q8IVE0 287 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 FAM219AQ8IW50 185 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 OR11H7Q8NGC8 314 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 OR13C8Q8NGS7 320 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 RNASE8Q8TDE3 154 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 ACY3Q96HD9 319 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 DOK5Q9P104 306 aa6.6□□□□□ -1.35
HDGFL3-204ENST00000563790 TRAV8-2A0A0B4J237 113 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 M0R2Z0 102 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 TAAR5O14804 337 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 APOA1P02647 267 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 OR5AC1P0C628 307 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 PGAM2P15259 253 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 ZNF415Q09FC8 603 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 GAMTQ14353 236 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 LAGE3Q14657 143 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 MEF2DQ14814 521 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 SNX29P2Q8IUI4 249 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 SELENOHQ8IZQ5 122 aaKnown RBP6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 ARRDC1Q8N5I2 433 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 YIPF6Q96EC8 236 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 HEYLQ9NQ87 328 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-204ENST00000563790 IGHV3-38A0A0C4DH36 116 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 ATG12O94817 140 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 CRYGAP11844 174 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 ID1P41134 155 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 NEDD8Q15843 81 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 MRPL23Q16540 153 aaKnown RBP6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 SPINK13Q1W4C9 94 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 TRIM16LQ309B1 348 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM144Q7Z5S9 345 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 BAP18Q8IXM2 172 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 TERB2Q8NHR7 220 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 RRNAD1Q96FB5 475 aaKnown RBP6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 PBDC1Q9BVG4 233 aa6.58□□□□□ -1.36
HDGFL3-204ENST00000563790 PAX4O43316 350 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 B3GALNT1O75752 331 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 GYPEP15421 78 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 NUP62P37198 522 aaPredicted RBP6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 TAS2R60P59551 318 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 CIRBPQ14011 172 aaKnown RBP6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 ETFRF1Q6IPR1 90 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 THAP8Q8NA92 274 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 OR52I2Q8NH67 350 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 COQ8AQ8NI60 647 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 MARCH1Q8TCQ1 289 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM263Q8WUH6 116 aaKnown RBP6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 SLC25A32Q9H2D1 315 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 VCX3BQ9H321 246 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 HSPB7Q9UBY9 170 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 MTFP1Q9UDX5 166 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM56-RWDD3S4R434 201 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
HDGFL3-204ENST00000563790 GPR98Q8WXG9 6306 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 TEX13DA0A0J9YY54 714 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 PRSS46E5RG02 174 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 HPGDSO60760 199 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 RLN2P04090 185 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 TBPP20226 339 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 LSM3P62310 102 aaKnown RBP6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 KLF9Q13886 244 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 EBLN2Q6P2I7 272 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM182Q6ZP80 229 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 TMEM256Q8N2U0 113 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 RPRMQ9NS64 109 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 COPZ2Q9P299 210 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 COMMD3Q9UBI1 195 aa6.56□□□□□ -1.36
HDGFL3-204ENST00000563790 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 CRYM-AS1A6NIL9 109 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 CEBPZOSA8MTT3 80 aa6.55□□□□□ -1.36
HDGFL3-204ENST00000563790 LYZP61626 148 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms