RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 H3BNG1 76 aa12.95□□□□□ -0.34
NME3-204ENST00000563498 ADAP1O75689 374 aa12.95□□□□□ -0.34
NME3-204ENST00000563498 SELENOTP62341 195 aa12.95□□□□□ -0.34
NME3-204ENST00000563498 DYNC2LI1Q8TCX1 351 aa12.95□□□□□ -0.34
NME3-204ENST00000563498 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
NME3-204ENST00000563498 H3BP45 60 aa12.94□□□□□ -0.34
NME3-204ENST00000563498 LINC00869P0C866 280 aa12.94□□□□□ -0.34
NME3-204ENST00000563498 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
NME3-204ENST00000563498 OR5I1Q13606 314 aa12.94□□□□□ -0.34
NME3-204ENST00000563498 LRRC20Q8TCA0 184 aa12.94□□□□□ -0.34
NME3-204ENST00000563498 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
NME3-204ENST00000563498 FABP12A6NFH5 140 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 SFT2D2O95562 160 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 OR5G3P0C626 314 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 CXCL2P19875 107 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 UHRF2Q96PU4 802 aa12.93□□□□□ -0.34
NME3-204ENST00000563498 SLC25A21Q9BQT8 299 aaPredicted RBP12.93□□□□□ -0.34
NME3-204ENST00000563498 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
NME3-204ENST00000563498 SMCO3A2RU48 225 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 ZNF701M0R085 212 aaPredicted RBP12.92□□□□□ -0.34
NME3-204ENST00000563498 TNFSF8P32971 234 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 AP3S2P59780 193 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 PPP1R1AQ13522 171 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 ESRGQ1W209 222 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 BCL7BQ9BQE9 202 aa12.92□□□□□ -0.34
NME3-204ENST00000563498 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
NME3-204ENST00000563498 K7EPK0 472 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 MRPS12O15235 138 aaKnown RBP12.91□□□□□ -0.34
NME3-204ENST00000563498 HOXB5P09067 269 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 HOXA5P20719 270 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 ID3Q02535 119 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 DEDD2Q8WXF8 326 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
NME3-204ENST00000563498 A0A0J9YY99 117 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 PMS2P5A8MQ11 134 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 RLN2P04090 185 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 TOMM5Q8N4H5 51 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 SLC50A1Q9BRV3 221 aa12.9□□□□□ -0.34
NME3-204ENST00000563498 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
NME3-204ENST00000563498 ZNF331Q9NQX6 463 aaPredicted RBP12.9□□□□□ -0.34
NME3-204ENST00000563498 HERC1Q15751 4861 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 FNDC10F2Z333 226 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
NME3-204ENST00000563498 TMBIM6P55061 237 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 DLK1P80370 383 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 C4orf46Q504U0 113 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 PATE2Q6UY27 113 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 ARL6Q9H0F7 186 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 ARV1Q9H2C2 271 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
NME3-204ENST00000563498 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 GAGE7O76087 117 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
NME3-204ENST00000563498 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
NME3-204ENST00000563498 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
NME3-204ENST00000563498 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
NME3-204ENST00000563498 UBE2MP61081 183 aaKnown RBP12.87□□□□□ -0.35
NME3-204ENST00000563498 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
NME3-204ENST00000563498 CCDC190Q86UF4 302 aa12.87□□□□□ -0.35
NME3-204ENST00000563498 MCFD2Q8NI22 146 aa12.87□□□□□ -0.35
NME3-204ENST00000563498 BATF3Q9NR55 127 aa12.87□□□□□ -0.35
NME3-204ENST00000563498 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
NME3-204ENST00000563498 DAZ2Q13117 558 aaKnown RBP12.86□□□□□ -0.35
NME3-204ENST00000563498 TMEM14EPQ6UXP3 125 aa12.86□□□□□ -0.35
NME3-204ENST00000563498 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
NME3-204ENST00000563498 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
NME3-204ENST00000563498 SSSCA1O60232 199 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 LINC00315P59091 139 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 SLC38A11Q08AI6 406 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 PYDC2Q56P42 97 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 Q6ZRN7 208 aaPredicted RBP12.85□□□□□ -0.35
NME3-204ENST00000563498 LINC00305Q7Z4B0 112 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 OR10P1Q8NGE3 313 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
NME3-204ENST00000563498 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 MGAT4CQ9UBM8 478 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
NME3-204ENST00000563498 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
NME3-204ENST00000563498 CCNKO75909 580 aa12.84□□□□□ -0.35
NME3-204ENST00000563498 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
NME3-204ENST00000563498 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
NME3-204ENST00000563498 A0A096LPF7 62 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 C9orf170A2RU37 121 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 GOSR2O14653 212 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 METTL15P1P0C7V9 234 aa12.83□□□□□ -0.36
NME3-204ENST00000563498 LEPP41159 167 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms