RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 FAM223BA6NKX1 122 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 ATP5G2Q06055 141 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 RBPMS2Q6ZRY4 209 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 FAM223AQ8IWN6 122 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 MS4A10Q96PG2 267 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 ABCA1O95477 2261 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 A0A1B0GXF2 115 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 IGHV4-38-2P0DP08 117 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 SLC25A16P16260 332 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 GATA3P23771 443 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 SRIP30626 198 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 IQCJQ1A5X6 159 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 KIAA1644Q3SXP7 199 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 C16orf54Q6UWD8 224 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TCF24Q7RTU0 167 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 ZFAND3Q9H8U3 227 aa16.59■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TRAV20A0A0B4J274 112 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 M0QZK8 103 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 PKIAP61925 76 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 HBBP68871 147 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 RELQ04864 619 aaPredicted RBP16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 C19orf54Q5BKX5 351 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CLEC19AQ6UXS0 136 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 OR2D3Q8NGH3 330 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CCDC140Q96MF4 163 aa16.58■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 M0R3E3 92 aa16.57■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 COX6B1P14854 86 aa16.57■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 LINC00310P59036 64 aa16.57■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 ZC2HC1AQ96GY0 325 aa16.57■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 USP24Q9UPU5 2620 aa16.57■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SLAQ13239 276 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 GTSF1Q8WW33 167 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 A0A087X0K7 114 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 A6NDX4 124 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 TSTD3H0UI37 97 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CT45A10P0DMU9 189 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 NOL4LQ96MY1 436 aaPredicted RBP16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SAMD10Q9BYL1 202 aa16.56■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 IGF1P05019 195 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CAMPP49913 170 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 C9orf152Q5JTZ5 239 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SAPCD1Q5SSQ6 148 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 C1orf194Q5T5A4 169 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 GDF5OSQ5U4N7 250 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 PGLYRP4Q96LB8 373 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 HIF1ANQ9NWT6 349 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SMAD5-AS1Q9Y6J3 95 aa16.55■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 PRB1P04280 392 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 KCNS1Q96KK3 526 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 IGHV3-35A0A0C4DH35 117 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 ZNF785A8K8V0 405 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 F2Z2F3 143 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 H3BUA1 57 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 BUB3O43684 328 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 BRI3O95415 125 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 FOXA3P55318 350 aaPredicted RBP16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SIGLECL1Q8N7X8 197 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 METTL26Q96S19 204 aa16.54■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 DOPEY1Q5JWR5 2465 aa16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CACNA1BQ00975 2339 aa16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 H3BUX3 64 aa16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 SCGB1D1O95968 90 aa16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 TRGV3P03979 118 aa16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 KLF5Q13887 457 aaPredicted RBP16.53■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 A8MWP6 167 aa16.52■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 CHEK1O14757 476 aa16.52■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 Q6AWC8 147 aa16.52■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 COX8CQ7Z4L0 72 aa16.52■□□□□ 0.24
VPS9D1-AS1-202ENST00000562866 IGSF10Q6WRI0 2623 aa16.52■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ABCA2Q9BZC7 2435 aa16.52■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 MED13LQ71F56 2210 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 IGHV3OR16-8A0A075B7F1 116 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 HAX1O00165 279 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 IGHG2P01859 326 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 CTAG1AP78358 180 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 LY6EQ16553 131 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ZNF843Q8N446 348 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 SLC50A1Q9BRV3 221 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 NAGKQ9UJ70 344 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 CLPSL1A2RUU4 121 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 LINC01356Q8N9X3 169 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 C18orf32Q8TCD1 76 aa16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 BBC3Q96PG8 261 aaPredicted RBP16.51■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 CFAP46Q8IYW2 2715 aa16.5■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 A0A1B0GW15 77 aa16.5■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 GPX1P07203 203 aa16.5■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 ALKBH7Q9BT30 221 aaPredicted RBP16.5■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 AKAP6Q13023 2319 aa16.5■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 IGKV2-40A0A087WW87 121 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 IGKV2D-40P01614 121 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 RIGQ13278 110 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 FAM162BQ5T6X4 162 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 Q6ZWC4 215 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 NRGNQ92686 78 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 USMG5Q96IX5 58 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 SSBP4Q9BWG4 385 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 A0A1W2PS18 150 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 J3QLI3 93 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 CRIP1P50238 77 aa16.49■□□□□ 0.23
VPS9D1-AS1-202ENST00000562866 Q71RC1 249 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms