RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 A0A087X0K7 114 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 H7BYZ3 331 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 LINC00869P0C866 280 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 ANXA7P20073 488 aaKnown RBP11.54□□□□□ -0.56
CMTM3-205ENST00000562707 PLP1P60201 277 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
CMTM3-205ENST00000562707 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
CMTM3-205ENST00000562707 TRAV26-1A0A087WT03 109 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 M6PRP20645 277 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
CMTM3-205ENST00000562707 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
CMTM3-205ENST00000562707 TMBIM6P55061 237 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 ID3Q02535 119 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 MCFD2Q8NI22 146 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 BCL7BQ9BQE9 202 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 Q9H3A6 140 aa11.52□□□□□ -0.57
CMTM3-205ENST00000562707 A0A0J9YY99 117 aa11.51□□□□□ -0.57
CMTM3-205ENST00000562707 PRB4P10163 310 aaPredicted RBP11.51□□□□□ -0.57
CMTM3-205ENST00000562707 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
CMTM3-205ENST00000562707 PYDC2Q56P42 97 aa11.51□□□□□ -0.57
CMTM3-205ENST00000562707 SLIRPQ9GZT3 109 aaKnown RBP11.51□□□□□ -0.57
CMTM3-205ENST00000562707 NPVFQ9HCQ7 196 aa11.51□□□□□ -0.57
CMTM3-205ENST00000562707 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 PMS2P5A8MQ11 134 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-205ENST00000562707 NOL3O60936 208 aaKnown RBP11.5□□□□□ -0.57
CMTM3-205ENST00000562707 GAGE7O76087 117 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 RLN2P04090 185 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 GAGE12FP0CL80 117 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 GAGE12GP0CL81 117 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 GAGE12IP0CL82 117 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 CXCL2P19875 107 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 BTF3P20290 206 aaKnown RBP11.5□□□□□ -0.57
CMTM3-205ENST00000562707 RRAS2P62070 204 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-205ENST00000562707 ESRGQ1W209 222 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 UPK3BQ9BT76 320 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
CMTM3-205ENST00000562707 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
CMTM3-205ENST00000562707 DLK1P80370 383 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 TEPPQ6URK8 271 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 LINC00612Q8N6U2 182 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 DEDD2Q8WXF8 326 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 TRIM63Q969Q1 353 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 SMIM8Q96KF7 97 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 ZNF331Q9NQX6 463 aaPredicted RBP11.49□□□□□ -0.57
CMTM3-205ENST00000562707 MGAT4CQ9UBM8 478 aa11.49□□□□□ -0.57
CMTM3-205ENST00000562707 FNDC10F2Z333 226 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 H3BNG1 76 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 K7EPK0 472 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 GOSR2O14653 212 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
CMTM3-205ENST00000562707 SSSCA1O60232 199 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 HOXA5P20719 270 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 CCDC190Q86UF4 302 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 OR10P1Q8NGE3 313 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
CMTM3-205ENST00000562707 DNAH5Q8TE73 4624 aa11.48□□□□□ -0.57
CMTM3-205ENST00000562707 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
CMTM3-205ENST00000562707 UBE2MP61081 183 aaKnown RBP11.47□□□□□ -0.57
CMTM3-205ENST00000562707 SLC38A11Q08AI6 406 aa11.47□□□□□ -0.57
CMTM3-205ENST00000562707 KIR3DS1Q14943 382 aa11.47□□□□□ -0.57
CMTM3-205ENST00000562707 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
CMTM3-205ENST00000562707 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
CMTM3-205ENST00000562707 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
CMTM3-205ENST00000562707 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-205ENST00000562707 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
CMTM3-205ENST00000562707 CCNKO75909 580 aa11.46□□□□□ -0.57
CMTM3-205ENST00000562707 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.57
CMTM3-205ENST00000562707 ZNF546Q86UE3 836 aa11.46□□□□□ -0.57
CMTM3-205ENST00000562707 J3KRW8 73 aa11.45□□□□□ -0.58
CMTM3-205ENST00000562707 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
CMTM3-205ENST00000562707 TMEM14EPQ6UXP3 125 aa11.45□□□□□ -0.58
CMTM3-205ENST00000562707 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
CMTM3-205ENST00000562707 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 H3BMQ9 156 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 AGPAT2O15120 278 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 LEPP41159 167 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 V9GYH0 126 aa11.44□□□□□ -0.58
CMTM3-205ENST00000562707 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
CMTM3-205ENST00000562707 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
CMTM3-205ENST00000562707 H3BTX0 84 aa11.43□□□□□ -0.58
CMTM3-205ENST00000562707 SCGB1D2O95969 90 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms