RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 DPPA3Q6W0C5 159 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 WDR86Q86TI4 376 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 OR9G1Q8NH87 305 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 NABP1Q96AH0 204 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 ARHGAP5-AS1Q96IT6 56 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 VGLL1Q99990 258 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 PYGO2Q9BRQ0 406 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 FAM60AQ9NP50 221 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF581Q9P0T4 197 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 TAAR3PQ9P1P4 343 aa4.27□□□□□ -1.73
CAPN3-211ENST00000562199 KMT2EQ8IZD2 1858 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV1D-8A0A087WSZ0 117 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 H3BMG7 143 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV3-11P04433 115 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 CD55P08174 381 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 HLA-DOBP13765 273 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 CRISP2P16562 243 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 FOLR3P41439 243 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 ERCC8Q13216 396 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 NUMA1Q14980 2115 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 NSUN5P1Q3KNT7 163 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 LINC00305Q7Z4B0 112 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 Q8N976 141 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 WFDC11Q8NEX6 87 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 PATE1Q8WXA2 126 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 KCNS1Q96KK3 526 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 PRELID3AQ96N28 172 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 PMCHL2Q9BQD1 86 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 SHANK2-AS3Q9BTD1 123 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 EIF5A2Q9GZV4 153 aaKnown RBP4.26□□□□□ -1.73
CAPN3-211ENST00000562199 C11orf68Q9H3H3 251 aaKnown RBP4.26□□□□□ -1.73
CAPN3-211ENST00000562199 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV1D-43A0A0B4J1Z2 117 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 PGPA6NDG6 321 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 DIRC3C9JPN6 131 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 C5orf67F2Z3F1 127 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 H0Y9J4 135 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 SDCBPO00560 298 aaPredicted RBP4.25□□□□□ -1.73
CAPN3-211ENST00000562199 SCRG1O75711 98 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 TCRAP04437 139 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 HSPB1P04792 205 aaKnown RBP4.25□□□□□ -1.73
CAPN3-211ENST00000562199 IGHV4-31P0DP07 118 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
CAPN3-211ENST00000562199 CLEC19AQ6UXS0 136 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 GTSCR1Q86UQ5 136 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 PCP2Q8IVA1 136 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 RNF182Q8N6D2 247 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 FAM213BQ8TBF2 198 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 ZNF721Q8TF20 911 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 COPS9Q8WXC6 57 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 ABHD14BQ96IU4 210 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 C18orf12Q96KH6 178 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 TMEM204Q9BSN7 226 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 SRXN1Q9BYN0 137 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 C11orf1Q9H5F2 150 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 MAP6D1Q9H9H5 199 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 OR2W1Q9Y3N9 320 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 C2orf16Q68DN1 1984 aa4.25□□□□□ -1.73
CAPN3-211ENST00000562199 HEATR5AQ86XA9 2040 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 TRAV9-2A0A087WT02 112 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 TRAV8-1A0A0A6YYK1 113 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 RBAKDNA6NC62 111 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 C17orf51A8MQB3 221 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 C10orf142B7Z368 130 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 SYS1-DBNDD2H3BUS1 97 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 H3BUT2 72 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 LGALS9O00182 355 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 RBP4P02753 201 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 PRH1P02810 166 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 SRP19P09132 144 aaKnown RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 CCL5P13501 91 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 COX7CP15954 63 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 CBLN1P23435 193 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 HLA-DMBP28068 263 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 KRTAP1-1Q07627 177 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 LGALS9BQ3B8N2 356 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 ABCA11PQ4W5N1 156 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 SP5Q6BEB4 398 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 Q6ZS49 121 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 RPP25LQ8N5L8 163 aaKnown RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 SMRP1Q8NCR6 262 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 CMTM2Q8TAZ6 248 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 LSM10Q969L4 123 aaKnown RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 RBMXL1Q96E39 390 aaKnown RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 PARP12Q9H0J9 701 aaKnown RBP4.24□□□□□ -1.73
CAPN3-211ENST00000562199 LHFPL6Q9Y693 200 aa4.24□□□□□ -1.73
CAPN3-211ENST00000562199 TRAV8-3A0A0A6YYJ7 113 aa4.23□□□□□ -1.73
CAPN3-211ENST00000562199 IGKV1D-13A0A0B4J2D9 117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms