RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 CXCL3P19876 107 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 DEFB125Q8N687 156 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 SPATA3Q8NHX4 192 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 SUN5Q8TC36 379 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF586Q9NXT0 402 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 AKR1D1P51857 326 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 ZFAND6Q6FIF0 208 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 RITA1Q96K30 269 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
TRPM1-212ENST00000560801 LOC102723971A0A1B0GUV8 181 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 GRIFINA4D1Z8 144 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 NDUFA3O95167 84 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF138P52744 262 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 PAX9P55771 341 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 S100A12P80511 92 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 ATP6V0BQ99437 205 aa7.52□□□□□ -1.2
TRPM1-212ENST00000560801 HMSDA8MTL9 139 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 PMCHP20382 165 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 OR10G8Q8NGN5 311 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 WDR83OSQ9Y284 106 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 TRAV34A0A0B4J273 112 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 IGF1P05019 195 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 TCTE3Q8IZS6 198 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 PUSL1Q8N0Z8 303 aaKnown RBP7.52□□□□□ -1.21
TRPM1-212ENST00000560801 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.21
TRPM1-212ENST00000560801 POU2AF1Q16633 256 aa7.52□□□□□ -1.21
TRPM1-212ENST00000560801 NDUFB4O95168 129 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 LYL1P12980 280 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
TRPM1-212ENST00000560801 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
TRPM1-212ENST00000560801 MS4A6AQ9H2W1 248 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 AURKAIP1Q9NWT8 199 aaPredicted RBP7.51□□□□□ -1.21
TRPM1-212ENST00000560801 RBFOX3A6NFN3 312 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 SPRY2O43597 315 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 SRIP30626 198 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
TRPM1-212ENST00000560801 IGLC7A0M8Q6 106 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 G3V3Q6 166 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 UBE2CO00762 179 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
TRPM1-212ENST00000560801 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 SVBPQ8N300 66 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 ITPR3Q14573 2671 aa7.51□□□□□ -1.21
TRPM1-212ENST00000560801 C20orf202A1L168 122 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 G0S2P27469 103 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
TRPM1-212ENST00000560801 RPP25LQ8N5L8 163 aaKnown RBP7.5□□□□□ -1.21
TRPM1-212ENST00000560801 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
TRPM1-212ENST00000560801 SHANK2-AS3Q9BTD1 123 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 C5orf42Q9H799 3197 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 CGB3P0DN86 165 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 FOXI2Q6ZQN5 318 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 CADM3Q8N126 398 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 PEX7O00628 323 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 CSN3P07498 182 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 CDKN1BP46527 198 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 A0A1B0GW64 132 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 TMEM88Q6PEY1 159 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 ST6GAL2Q96JF0 529 aa7.5□□□□□ -1.21
TRPM1-212ENST00000560801 ZNF705DP0CH99 300 aaPredicted RBP7.49□□□□□ -1.21
TRPM1-212ENST00000560801 ZNF705BP0CI00 300 aaPredicted RBP7.49□□□□□ -1.21
TRPM1-212ENST00000560801 PSG8Q9UQ74 426 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 DEFB4AO15263 64 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 SLAQ13239 276 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 EXOC3-AS1Q8N2X6 119 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 M0R2Z0 102 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 LINC00482Q8N8I6 264 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 OR8A1Q8NGG7 326 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 OR4D5Q8NGN0 318 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 FAM110AQ9BQ89 295 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 TMPRSS5Q9H3S3 457 aa7.49□□□□□ -1.21
TRPM1-212ENST00000560801 GCN1Q92616 2671 aaKnown RBP7.49□□□□□ -1.21
TRPM1-212ENST00000560801 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 K7EMT4 169 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 Q6ZRM9 215 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
TRPM1-212ENST00000560801 ATP5G1P05496 136 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 NTF3P20783 257 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 ATP5G3P48201 142 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
TRPM1-212ENST00000560801 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
TRPM1-212ENST00000560801 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
TRPM1-212ENST00000560801 RNF182Q8N6D2 247 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms