RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 C21orf62Q9NYP8 219 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 THYN1Q9P016 225 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 IGHV3OR16-13A0A075B7E8 117 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 IGHV3-74A0A0B4J1X5 117 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 TRAV1-1A0A0B4J248 108 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 UBE2L5PA0A1B0GUS4 154 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 C9JQL5 133 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
TPM1-225ENST00000560679 NUPL2O15504 423 aaKnown RBP7.1□□□□□ -1.27
TPM1-225ENST00000560679 SNAPINO95295 136 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 HRASP01112 189 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 IFNA17P01571 189 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 CTSGP08311 255 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 RAB2AP61019 212 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
TPM1-225ENST00000560679 ATP6V0BQ99437 205 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 MS4A6AQ9H2W1 248 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 SMDT1Q9H4I9 107 aa7.1□□□□□ -1.27
TPM1-225ENST00000560679 PMS2P5A8MQ11 134 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 UPK2O00526 184 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 PPT1P50897 306 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 SERF2P84101 59 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 TMEM41BQ5BJD5 291 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 C1orf134Q5TEV5 83 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 CSNK1G2-AS1Q8NCQ2 148 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 OR10P1Q8NGE3 313 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 RSG1Q9BU20 258 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 EIF5A2Q9GZV4 153 aaKnown RBP7.09□□□□□ -1.27
TPM1-225ENST00000560679 SCRT2Q9NQ03 307 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 CLEC5AQ9NY25 188 aa7.09□□□□□ -1.27
TPM1-225ENST00000560679 F11RQ9Y624 299 aaKnown RBP7.09□□□□□ -1.27
TPM1-225ENST00000560679 A0A1B0GV50 99 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 RBFOX3A6NFN3 312 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 FAM74A7A6NL05 159 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 IFNA10P01566 189 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
TPM1-225ENST00000560679 OR13C7P0DN81 318 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 FGF7P21781 194 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 NPBWR1P48145 328 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 HOXA1P49639 335 aaPredicted RBP7.08□□□□□ -1.28
TPM1-225ENST00000560679 HSPE1P61604 102 aaKnown RBP7.08□□□□□ -1.28
TPM1-225ENST00000560679 CCL20P78556 96 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 FAM74A3Q4VXF1 159 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 Q56UQ5 140 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 SOHLH1Q5JUK2 328 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 ZNF506Q5JVG8 444 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 STHQ8IWL8 128 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 AIFM2Q9BRQ8 373 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 SLC35B3Q9H1N7 401 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 HEYLQ9NQ87 328 aaPredicted RBP7.08□□□□□ -1.28
TPM1-225ENST00000560679 RPRMQ9NS64 109 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 TMEM14BQ9NUH8 114 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 PRNDQ9UKY0 176 aa7.08□□□□□ -1.28
TPM1-225ENST00000560679 YIF1AO95070 293 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 MBP02144 154 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 PAFAH1B2P68402 229 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 DLK1P80370 383 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 MORN3Q6PF18 240 aaPredicted RBP7.07□□□□□ -1.28
TPM1-225ENST00000560679 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 GGACTQ9BVM4 153 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 COMMD5Q9GZQ3 224 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 ENY2Q9NPA8 101 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 WDR83OSQ9Y284 106 aa7.07□□□□□ -1.28
TPM1-225ENST00000560679 TRAV2A0A0B4J234 112 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 IGHV3-66A0A0C4DH42 116 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 TEX50A0A1B0GTY4 177 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 KNCNA6PVL3 124 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 CYB5BO43169 146 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 IFNA1P01562 189 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 RAB11AP62491 216 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 RELQ04864 619 aaPredicted RBP7.06□□□□□ -1.28
TPM1-225ENST00000560679 ICAM4Q14773 271 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 ZNF726P1Q15940 193 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 KHDC3LQ587J8 217 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 ZNF709Q8N972 641 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 NDUFA4L2Q9NRX3 87 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 OR51B2Q9Y5P1 312 aa7.06□□□□□ -1.28
TPM1-225ENST00000560679 CTXND1A0A1B0GTU2 59 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 MAP1LC3B2A6NCE7 125 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 PRSS46E5RG02 174 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 I3L2K1 104 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 MPDU1O75352 247 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 SRP19P09132 144 aaKnown RBP7.05□□□□□ -1.28
TPM1-225ENST00000560679 BCL2P10415 239 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 NPY1RP25929 384 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 PRCDQ00LT1 54 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 FFAR4Q5NUL3 377 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 LCN15Q6UWW0 184 aa7.05□□□□□ -1.28
TPM1-225ENST00000560679 SSX7Q7RTT5 188 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms