RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 RNF11Q9Y3C5 154 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 UFC1Q9Y3C8 167 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 MIA2Q96PC5 1412 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PEAK1Q9H792 1746 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CITO14578 2027 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 USP24Q9UPU5 2620 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CEP164Q9UPV0 1460 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 TRPM1Q7Z4N2 1603 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ALPK3Q96L96 1907 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 MYO18AQ92614 2054 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 UNC13CQ8NB66 2214 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 TET1Q8NFU7 2136 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 EML5Q05BV3 1969 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CASP8AP2Q9UKL3 1982 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 E9PCH4 1651 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 NISCHQ9Y2I1 1504 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 A0A0D9SG42 100 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 RIIAD1A6NNX1 92 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 TMEM238C9JI98 176 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 F8W1H4 67 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 G3V2T6 193 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 H3BRM9 83 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 M0R233 179 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 RER1O15258 196 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CST8O60676 142 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 ATG12O94817 140 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 DNAL4O96015 105 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 IFNA14P01570 189 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 IGLV3-1P01715 115 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 PRH1P02810 166 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CSN2P05814 226 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CXCL1P09341 107 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 KRTAP2-3P0C7H8 128 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CRYBA4P53673 196 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 TMBIM6P55061 237 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 ARPP19P56211 112 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 FXYD4P59646 89 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 GNG3P63215 75 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 HBBP68871 147 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 RPL19P84098 196 aaKnown RBP0.08□□□□□ -2.4
SPG11-222ENST00000560435 MIR22HGQ0VDD5 57 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 KLRD1Q13241 179 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 EIF3IQ13347 325 aaKnown RBP0.08□□□□□ -2.4
SPG11-222ENST00000560435 POU6F1Q14863 301 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 MSMO1Q15800 293 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 LTC4SQ16873 150 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 SPATA45Q537H7 98 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 FKBP1CQ5VVH2 108 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 TMEM14EPQ6UXP3 125 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 FOXI2Q6ZQN5 318 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 TMED4Q7Z7H5 227 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 TEN1Q86WV5 123 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 LINC00269Q8N2A0 174 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 SMIM20Q8N5G0 67 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 OR4K15Q8NH41 348 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CCL4L1Q8NHW4 92 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 AP3S1Q92572 193 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 DIRC1Q969H9 104 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 CEP19Q96LK0 163 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 GINS3Q9BRX5 216 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 GGACTQ9BVM4 153 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 KRTAP2-4Q9BYR9 128 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 KRTAP2-1Q9BYU5 128 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 OTORQ9NRC9 128 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 LAMTOR3Q9UHA4 124 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 HSPB8Q9UJY1 196 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 STOML2Q9UJZ1 356 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 SSR3Q9UNL2 185 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 NUBP2Q9Y5Y2 271 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 SNRNP200O75643 2136 aaKnown RBP0.08□□□□□ -2.4
SPG11-222ENST00000560435 BDP1A6H8Y1 2624 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 DOCK4Q8N1I0 1966 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 SIP14410 1827 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 NUP98P52948 1817 aa0.08□□□□□ -2.4
SPG11-222ENST00000560435 ASCC3Q8N3C0 2202 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 RTL9Q8NET4 1388 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 COL24A1Q17RW2 1714 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 FRMPD1Q5SYB0 1578 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 HEATR1Q9H583 2144 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 UBR2Q8IWV8 1755 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 BCL9O00512 1426 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 UHRF1BP1Q6BDS2 1440 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 ZFC3H1O60293 1989 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 PHRF1Q9P1Y6 1649 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 MUC4Q99102 2169 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 hDV103S1A0JD37 113 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 OR2T8A6NH00 312 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 PPP5D1E7EU14 171 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 JMJD7-PLA2G4BH0Y9G9 81 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 GPR31O00270 319 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 HIST1H2BKO60814 126 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 BANF1O75531 89 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 IGHV3-30P01768 117 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 APOA2P02652 100 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 IFNA4P05014 189 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 CD2P06729 351 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 HIST1H2BJP06899 126 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 IGHV3-30-5P0DP03 117 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 IDO1P14902 403 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms