RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 C2orf70A6NJV1 201 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 CHEK1O14757 476 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 ARMS2P0C7Q2 107 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 TMEM75Q8N9X5 138 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 GFRA4Q9GZZ7 299 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 RPLP1P05386 114 aaKnown RBP7.87□□□□□ -1.15
LRRC28-216ENST00000559819 ZNF25P17030 456 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-216ENST00000559819 TFPI2P48307 235 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 PSG3Q16557 428 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 LOC102724200A0A096LPH7 203 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-216ENST00000559819 IGHV1-24A0A0C4DH33 117 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 IGHV3-35A0A0C4DH35 117 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 MFAP4P55083 255 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 IGFL4Q6B9Z1 124 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 ZNF562Q6V9R5 426 aa7.87□□□□□ -1.15
LRRC28-216ENST00000559819 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-216ENST00000559819 SOX21Q9Y651 276 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-216ENST00000559819 COL6A6A6NMZ7 2263 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TMSB15BA0A087X1C1 80 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 NPIPB5A8MRT5 1133 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 HAX1O00165 279 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 CSN3P07498 182 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 Q6ZN92 141 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TXN2Q99757 166 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TRBV6-1A0A0K0K1D8 114 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 M0QZK8 103 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-216ENST00000559819 EGR2P11161 476 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TMEM11P17152 192 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TTC9CQ8N5M4 171 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 Q8N6K4 173 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 UQCR10Q9UDW1 63 aa7.86□□□□□ -1.15
LRRC28-216ENST00000559819 TIMM8BQ9Y5J9 83 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-216ENST00000559819 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 SFTPCP11686 197 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 HLA-DMBP28068 263 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 LPAR2Q9HBW0 351 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 C1RLQ9NZP8 487 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 IGHV7-81A0A0B4J1V7 117 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 MUC21A0A0G2JKD1 596 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 MUC21A0A140T8X8 626 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
LRRC28-216ENST00000559819 MUC21Q5SSG8 566 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 MCRIP2Q9BUT9 160 aaKnown RBP7.85□□□□□ -1.15
LRRC28-216ENST00000559819 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
LRRC28-216ENST00000559819 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.84□□□□□ -1.15
LRRC28-216ENST00000559819 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 K7EQM0 130 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 IGLL1P15814 213 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 RELQ04864 619 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-216ENST00000559819 LYPD1Q8N2G4 141 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 UBTD1Q9HAC8 227 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 LINC00614P0C842 121 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 UCNP55089 124 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 LY6DQ14210 128 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 CCDC144NLQ6NUI1 221 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 MRPL52Q86TS9 123 aaKnown RBP7.84□□□□□ -1.15
LRRC28-216ENST00000559819 DTX2Q86UW9 622 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 TMUB1Q9BVT8 246 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 AAMDCQ9H7C9 122 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 RNF24Q9Y225 148 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 SMAD5-AS1Q9Y6J3 95 aa7.84□□□□□ -1.15
LRRC28-216ENST00000559819 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 H0Y8G0 127 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 CTSGP08311 255 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 ECSCRQ19T08 205 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 Q8N9W7 124 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 Q8TAT8 98 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
LRRC28-216ENST00000559819 NDFIP1Q9BT67 221 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 SIRPDQ9H106 197 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 LEPROTL1O95214 131 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 STPG4Q8N801 248 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 TMEM208Q9BTX3 173 aa7.83□□□□□ -1.16
LRRC28-216ENST00000559819 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 WNK2Q9Y3S1 2297 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 SH2D1AO60880 128 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 RIGQ13278 110 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 EBI3Q14213 229 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 KLHDC1Q8N7A1 406 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF48Q96MX3 618 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-216ENST00000559819 SERTM2A0A1B0GWG4 89 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 TMEM213A2RRL7 107 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 TSPOP30536 169 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 GPR183P32249 361 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 MINOS1Q5TGZ0 78 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 C1orf122Q6ZSJ8 110 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 VGLL1Q99990 258 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms