RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 IAPPP10997 89 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 CXCL3P19876 107 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 RPP30P78346 268 aaKnown RBP12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 AKR1C1Q04828 323 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 AP3S1Q92572 193 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
TSPAN3-204ENST00000558394 H3BRN7 92 aa12.17□□□□□ -0.46
TSPAN3-204ENST00000558394 LYZL2Q7Z4W2 148 aa12.17□□□□□ -0.46
TSPAN3-204ENST00000558394 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
TSPAN3-204ENST00000558394 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
TSPAN3-204ENST00000558394 HIGD1AQ9Y241 93 aa12.17□□□□□ -0.46
TSPAN3-204ENST00000558394 ANXA3P12429 323 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 SRPXP78539 464 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 HAMPP81172 84 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 SCGB3A2Q96PL1 93 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 PRRT1Q99946 306 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 SHANK2-AS3Q9BTD1 123 aa12.16□□□□□ -0.46
TSPAN3-204ENST00000558394 PIGBOS1A0A0B4J2F0 54 aa12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 MED6O75586 246 aa12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 TMEM182Q6ZP80 229 aaPredicted RBP12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
TSPAN3-204ENST00000558394 A0A087X0K7 114 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 HYPMO75409 117 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 IL5P05113 134 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 OR5G3P0C626 314 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 GFI1BQ5VTD9 330 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 Q6ZTI0 123 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 RNF24Q9Y225 148 aa12.14□□□□□ -0.47
TSPAN3-204ENST00000558394 J3KRW8 73 aa12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 MRPS10P82664 201 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 TMEM70Q9BUB7 260 aa12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 NAA50Q9GZZ1 169 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
TSPAN3-204ENST00000558394 IGLV5-52A0A0A0MRZ9 124 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 PAX4O43316 350 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 OR51S1Q8NGJ8 323 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 SCP2D1Q9UJQ7 156 aa12.12□□□□□ -0.47
TSPAN3-204ENST00000558394 CTF1Q16619 201 aa12.11□□□□□ -0.47
TSPAN3-204ENST00000558394 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-204ENST00000558394 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 WRBO00258 174 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 PLA2G1BP04054 148 aaKnown RBP12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 LINC00869P0C866 280 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 SMIM18P0DKX4 95 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 CXCL2P19875 107 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
TSPAN3-204ENST00000558394 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 K7EP13 123 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 PITX3O75364 302 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 EVI2AP22794 236 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 LEPP41159 167 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 ACOT7LQ6ZUV0 252 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
TSPAN3-204ENST00000558394 PSCAO43653 123 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 SYNGR2O43760 224 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 ZNF324O75467 553 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 SELENOTP62341 195 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 ZNF331Q9NQX6 463 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 STRAPQ9Y3F4 350 aaKnown RBP12.08□□□□□ -0.48
TSPAN3-204ENST00000558394 RGS5O15539 181 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 PLP1P60201 277 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 SLAQ13239 276 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 MCUBQ9NWR8 336 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
TSPAN3-204ENST00000558394 H3BP45 60 aa12.06□□□□□ -0.48
TSPAN3-204ENST00000558394 SLC25A6P12236 298 aa12.06□□□□□ -0.48
TSPAN3-204ENST00000558394 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms