RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CFC1P0CG37 223 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 RNASE2P10153 161 aaKnown RBP9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 PCNTO95613 3336 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 ATP5G1P05496 136 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 HIGD1BQ9P298 99 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 SCN2AQ99250 2005 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 SNRNP200O75643 2136 aaKnown RBP9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 SPXQ9BT56 116 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 FOXI1Q12951 378 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 NDUFS7O75251 213 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRIP6Q15654 476 aaKnown RBP9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 SHANK2-AS3Q9BTD1 123 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 SDK2Q58EX2 2172 aa9.57□□□□□ -0.88
CSPG4P12-201ENST00000558282 IGHV3OR16-8A0A075B7F1 116 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 A0A087WX48 190 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRAV3A0A0B4J244 114 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 POLR2AP24928 1970 aaKnown RBP9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 A0A1W2PR77 199 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 TMEM213A2RRL7 107 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 LINC00473A8K010 186 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 SRRM5B3KS81 715 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 CENPVQ7Z7K6 275 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 APOBEC3AP31941 199 aaPredicted RBP9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 TDRD6O60522 2096 aaKnown RBP9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 K7EMI3 77 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 RFPL3SP0C7P2 107 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 CCL3L1P16619 93 aa9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 ZCCHC24Q8N2G6 241 aaKnown RBP9.56□□□□□ -0.88
CSPG4P12-201ENST00000558282 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 HERV-K104P63124 156 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRPT1Q86TN4 253 aaKnown RBP9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 TP53TG1Q9Y2A0 90 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRIOBPQ9H2D6 2365 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 FAM201AQ5SY85 155 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 Q6P435 159 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 ZNF474Q6S9Z5 364 aaPredicted RBP9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 DTX1Q86Y01 620 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 IGLV3-12A0A075B6K2 115 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 RPL36AP83881 106 aaKnown RBP9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 RPL36ALQ969Q0 106 aaKnown RBP9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 C17orf100A8MU93 164 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 PLAURQ03405 335 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 FOXC1Q12948 553 aa9.55□□□□□ -0.88
CSPG4P12-201ENST00000558282 WNT2P09544 360 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 PAX8Q06710 450 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 GLMPQ8WWB7 406 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRAV13-2A0A0B4J235 113 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 H0YJW9 148 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 PSPNO60542 156 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 IGHV1-2P23083 117 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 IL17RELQ6ZVW7 336 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 Q8TAT8 98 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 PLXNA1Q9UIW2 1896 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 J3QQQ9 107 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
CSPG4P12-201ENST00000558282 CACNA1EQ15878 2313 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 KIF26BQ2KJY2 2108 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 TRAV13-1A0A0B4J241 112 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 ERCC8Q13216 396 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 WFDC2Q14508 124 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 MDC1Q14676 2089 aaKnown RBP9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 SIP14410 1827 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 HAMPP81172 84 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 CSRP2Q16527 193 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 TDRG1Q3Y452 100 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 SLC25A45Q8N413 288 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 PEMTQ9UBM1 199 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 ITLN2Q8WWU7 325 aaPredicted RBP9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 C20orf78Q9BR46 151 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 CHCHD5Q9BSY4 110 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 NTN3O00634 580 aaPredicted RBP9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
CSPG4P12-201ENST00000558282 A0A1W2PPI3 338 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 C9orf172C9J069 976 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 TMEM14CQ9P0S9 112 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 MYO16Q9Y6X6 1858 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 LY6EQ16553 131 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 RNF144BQ7Z419 303 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 C1orf147Q96MC9 270 aaPredicted RBP9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 MED12Q93074 2177 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 TFF2Q03403 129 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms