RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ADAT3Q96EY9 351 aaPredicted RBP3.67□□□□□ -1.82
RTF1-204ENST00000558117 ZNF799Q96GE5 643 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 SPACA5Q96QH8 159 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 SDHCQ99643 169 aaPredicted RBP3.67□□□□□ -1.82
RTF1-204ENST00000558117 SLIRPQ9GZT3 109 aaKnown RBP3.67□□□□□ -1.82
RTF1-204ENST00000558117 ABCB9Q9NP78 766 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 MTFP1Q9UDX5 166 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 VAX2Q9UIW0 290 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 SLC7A11Q9UPY5 501 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 LINC00312Q9Y6C7 94 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 hADV38S2A0JD32 116 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 FAM25AB3EWG3 89 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 FAM25CB3EWG5 89 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 FAM25GB3EWG6 89 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 ZNF737O75373 536 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 UPK1BO75841 260 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 GATBO75879 557 aaKnown RBP3.66□□□□□ -1.82
RTF1-204ENST00000558117 ARL6IP5O75915 188 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 OR2A4O95047 310 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 C8orf88P0DMB2 117 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 IGHV3-43DP0DP04 118 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 ATF1P18846 271 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 CEACAM21Q3KPI0 293 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 TMEM244Q5VVB8 128 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 LINC00173Q6ZV60 143 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 SLC25A46Q96AG3 418 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 REEP6Q96HR9 211 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 CEP19Q96LK0 163 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 TMEM56Q96MV1 263 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 SULT4A1Q9BR01 284 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 MIXL1Q9H2W2 232 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 PLGRKTQ9HBL7 147 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 RASL12Q9NYN1 266 aa3.66□□□□□ -1.82
RTF1-204ENST00000558117 NUFIP1Q9UHK0 495 aaKnown RBP3.66□□□□□ -1.82
RTF1-204ENST00000558117 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 TRAV1-2A0A0B4J238 106 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 PDCD5O14737 125 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 FABP7O15540 132 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 SCTP09683 121 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 FUT3P21217 361 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 CDK2P24941 298 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 CAV2P51636 162 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 PPP3R1P63098 170 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 PRSS8Q16651 343 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 PDZD11Q5EBL8 140 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 OR10K2Q6IF99 312 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 SFXN4Q6P4A7 337 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 HEPN1Q6WQI6 88 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.83
RTF1-204ENST00000558117 ANGPTL5Q86XS5 388 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 STX12Q86Y82 276 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 OR5D14Q8NGL3 314 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 OR10K1Q8NGX5 313 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 OR2T10Q8NGZ9 312 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 OR5P3Q8WZ94 311 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 GALNT14Q96FL9 552 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 FAM210BQ96KR6 192 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 RTL8AQ9BWD3 113 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 PARP11Q9NR21 331 aa3.65□□□□□ -1.83
RTF1-204ENST00000558117 F11RQ9Y624 299 aaKnown RBP3.65□□□□□ -1.83
RTF1-204ENST00000558117 TRAV8-4A0A0B4J246 113 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 IGKV1-9A0A0C4DH69 117 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 IFITM5A6NNB3 132 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 KRTAP4-16G5E9R7 235 aaPredicted RBP3.64□□□□□ -1.83
RTF1-204ENST00000558117 PANO1I0J062 215 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 M0R036 132 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 TRBV12-3P01733 135 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 P01737 135 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 APOC1P02654 83 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 ISG15P05161 165 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 CD2P06729 351 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 PTHLHP12272 177 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 RCC1P18754 421 aaPredicted RBP3.64□□□□□ -1.83
RTF1-204ENST00000558117 RAB3AP20336 220 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 PVALBP20472 110 aaPredicted RBP3.64□□□□□ -1.83
RTF1-204ENST00000558117 BLVRBP30043 206 aaPredicted RBP3.64□□□□□ -1.83
RTF1-204ENST00000558117 TPPP2P59282 170 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 CACNG7P62955 275 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 FAM3AP98173 230 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 REG3AQ06141 175 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 SMIM21Q3B7S5 101 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 PYDC2Q56P42 97 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 FAM131AQ6UXB0 335 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 HAVCR2Q8TDQ0 301 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 DIRAS2Q96HU8 199 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 GPER1Q99527 375 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 OR51I2Q9H344 312 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 BANF2Q9H503 90 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 SLC25A22Q9H936 323 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 CKLFQ9UBR5 152 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 ANXA10Q9UJ72 324 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 V9GYS6 101 aa3.64□□□□□ -1.83
RTF1-204ENST00000558117 IGKV1-27A0A075B6S5 117 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 IGHV1-3A0A0C4DH29 117 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 ZNF736B4DX44 427 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms