RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SHANK2-AS3Q9BTD1 123 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 C5orf30Q96GV9 206 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 HIVEP2P31629 2446 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 LINC00527Q9UJ94 153 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 F8VVB4 439 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 F8VWA3 439 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 LGALS1P09382 135 aaKnown RBP6.78□□□□□ -1.32
CHD8-213ENST00000557364 DMRTA1Q5VZB9 504 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 TMEM75Q8N9X5 138 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 LY6G5BQ8NDX9 201 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 SLX1AQ9BQ83 275 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 ZNF319Q9P2F9 582 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 OVOL3O00110 214 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 PAX4O43316 350 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
CHD8-213ENST00000557364 IFI27L1Q96BM0 104 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 IGLV1-44P01699 117 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 MED13Q9UHV7 2174 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 SCRT1Q9BWW7 348 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
CHD8-213ENST00000557364 DDTP30046 118 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 DEFB131AP59861 70 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 SRSF4Q08170 494 aaKnown RBP6.78□□□□□ -1.32
CHD8-213ENST00000557364 ZNF833PQ6ZTB9 187 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 MED13LQ71F56 2210 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 CHAC1Q9BUX1 264 aa6.78□□□□□ -1.32
CHD8-213ENST00000557364 FAM231BA6NCW3 169 aa6.77□□□□□ -1.32
CHD8-213ENST00000557364 SRSF6Q13247 344 aaKnown RBP6.77□□□□□ -1.32
CHD8-213ENST00000557364 CA1P00915 261 aaPredicted RBP6.77□□□□□ -1.33
CHD8-213ENST00000557364 ZNF329Q86UD4 541 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 DENND4AQ7Z401 1863 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
CHD8-213ENST00000557364 IGKV2D-40P01614 121 aaPredicted RBP6.77□□□□□ -1.33
CHD8-213ENST00000557364 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 IFITM3Q01628 133 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
CHD8-213ENST00000557364 LDLRAD4O15165 306 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 TMEM170AQ8WVE7 144 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 MGST2Q99735 147 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 LIME1Q9H400 295 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 IGLV3-9A0A075B6K5 115 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 CT83Q5H943 113 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 IGKV1-27A0A075B6S5 117 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 MDKP21741 143 aaPredicted RBP6.77□□□□□ -1.33
CHD8-213ENST00000557364 CDKN1BP46527 198 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 DENND4CQ5VZ89 1909 aa6.77□□□□□ -1.33
CHD8-213ENST00000557364 ATP6V0E1O15342 81 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 NKAPP1Q8N9T2 125 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 LYPD2Q6UXB3 125 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 COL4A6Q14031 1691 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 PLCE1Q9P212 2302 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 RPRMLQ8N4K4 120 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 RNASE2P10153 161 aaKnown RBP6.76□□□□□ -1.33
CHD8-213ENST00000557364 SELLP14151 372 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 FOXG1P55316 489 aaPredicted RBP6.76□□□□□ -1.33
CHD8-213ENST00000557364 IGKV3D-20A0A0C4DH25 116 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 PFN1P07737 140 aaKnown RBP6.76□□□□□ -1.33
CHD8-213ENST00000557364 RNF126Q9BV68 326 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 TMEM14BQ9NUH8 114 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 CFPP27918 469 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 ST6GALNAC6Q969X2 333 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 SPG11Q96JI7 2443 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 TNCP24821 2201 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 EVI2AP22794 236 aa6.76□□□□□ -1.33
CHD8-213ENST00000557364 PRB3Q04118 309 aaPredicted RBP6.76□□□□□ -1.33
CHD8-213ENST00000557364 VWC2Q2TAL6 325 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 PRR30Q53SZ7 412 aaPredicted RBP6.75□□□□□ -1.33
CHD8-213ENST00000557364 LAIR2Q6ISS4 152 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 IGFL2Q6UWQ7 119 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 C1orf159Q96HA4 380 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 AGMATQ9BSE5 352 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 SH2D1AO60880 128 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 FOXE3Q13461 319 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 LY6G6EA0A0G2JKS1 128 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 RNF222A6NCQ9 220 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 LY6G6FQ5SQ64 297 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 U3KQA8 63 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 DAZAP2Q15038 168 aaPredicted RBP6.75□□□□□ -1.33
CHD8-213ENST00000557364 EXOC3-AS1Q8N2X6 119 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 C2orf16Q68DN1 1984 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 OTOGLQ3ZCN5 2332 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 MUC21A0A0G2JKD1 596 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 MUC21A0A140T8X8 626 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 H3BMM0 161 aa6.75□□□□□ -1.33
CHD8-213ENST00000557364 NDPQ00604 133 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms