RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CCDC168Q8NDH2 2452 aa4.87□□□□□ -1.63
CPSF2-205ENST00000556622 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 DSCAMO60469 2012 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 PGPA6NDG6 321 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 GGTLC3B5MD39 225 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 M0R2Z0 102 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 SLC17A3O00476 420 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 NUDT3O95989 172 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 PLAUP00749 431 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 LINC00614P0C842 121 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 SELLP14151 372 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 ORM2P19652 201 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 SRIP30626 198 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 GPR6P46095 362 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 FOXA3P55318 350 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 KRTDAPP60985 99 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 BSPH1Q075Z2 132 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 OR5I1Q13606 314 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 KIAA2026Q5HYC2 2103 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 SAPCD1Q5SSQ6 148 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 C1orf122Q6ZSJ8 110 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 TMEM256Q8N2U0 113 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 OR8B3Q8NGG8 313 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 OR1B1Q8NGR6 318 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 VN1R17PQ8TDU5 208 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 LEAP2Q969E1 77 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 FXYD5Q96DB9 178 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 OR8B2Q96RD0 313 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 TMEM191AQ9H0A3 160 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 GNB4Q9HAV0 340 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 CLEC5AQ9NY25 188 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 MRPS16Q9Y3D3 137 aaKnown RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 F11RQ9Y624 299 aaKnown RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 ADGRG4Q8IZF6 3080 aa4.86□□□□□ -1.63
CPSF2-205ENST00000556622 ANKRD17O75179 2603 aaKnown RBP4.86□□□□□ -1.63
CPSF2-205ENST00000556622 CADP27708 2225 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TRAV9-2A0A087WT02 112 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 A0A087WWL8 130 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 A0A1W2PPR1 153 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 A0A1W2PS18 150 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 GRIFINA4D1Z8 144 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 PSMB11A5LHX3 300 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 PGPEP1LA6NFU8 196 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
CPSF2-205ENST00000556622 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 BUB1B-PAK6H3BSN5 160 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 M0R1W7 72 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 SLC25A17O43808 307 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 CNIH1O95406 144 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 LTAP01374 205 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 IGHV3-7P01780 117 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TCRAP04437 139 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 HNF1AP20823 631 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 HTR1DP28221 377 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
CPSF2-205ENST00000556622 BMI1P35226 326 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 HNRNPA3P51991 378 aaKnown RBP4.85□□□□□ -1.63
CPSF2-205ENST00000556622 LINC00205P59089 165 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TNXAQ16473 311 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TPTE2P1Q5T6R2 138 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 SPATA31B1PQ5VZV4 182 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TCF23Q7RTU1 214 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 MOB3BQ86TA1 216 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 CIARTQ8N365 385 aaPredicted RBP4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TMEM75Q8N9X5 138 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 IGFBPL1Q8WX77 278 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 FOXC2Q99958 501 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 TMEM70Q9BUB7 260 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 MAP1LC3CQ9BXW4 147 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
CPSF2-205ENST00000556622 MS4A6AQ9H2W1 248 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 ST20Q9HBF5 79 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 SIGLEC9Q9Y336 463 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 DCHS2Q6V1P9 2916 aa4.85□□□□□ -1.63
CPSF2-205ENST00000556622 CHD3Q12873 2000 aaKnown RBP4.84□□□□□ -1.63
CPSF2-205ENST00000556622 IGKV1OR2-108A0A075B7D4 117 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 IGHV2-26A0A0B4J1V2 119 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 PPIAL4CA0A0B4J2A2 164 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 A0A1B0GV90 55 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 BMPR1BO00238 502 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 CRXO43186 299 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-205ENST00000556622 IGLV1-47P01700 117 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 IGLV2-23P01705 113 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 PPIAL4GP0DN37 164 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 LOXP28300 417 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-205ENST00000556622 MYCNOSP40205 109 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 MFAP4P55083 255 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 WT1-ASQ06250 92 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 DEFB113Q30KQ7 82 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 SPATA45Q537H7 98 aa4.84□□□□□ -1.63
CPSF2-205ENST00000556622 FAM53AQ6NSI3 398 aaPredicted RBP4.84□□□□□ -1.63
CPSF2-205ENST00000556622 MRPL54Q6P161 138 aaKnown RBP4.84□□□□□ -1.63
CPSF2-205ENST00000556622 C12orf54Q6X4T0 127 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms